Cluster: BackhedF_2015_ERR525690_bin.1_CGC135
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_4280 | BackhedF_2015_ERR525690_bin.1_k119_4280_1 | 746 | 1672 | + | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4280 | BackhedF_2015_ERR525690_bin.1_k119_4280_2 | 1685 | 2617 | + | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4280 | BackhedF_2015_ERR525690_bin.1_k119_4280_3 | 2680 | 4452 | + | 3.A.1.1.29 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4280 | BackhedF_2015_ERR525690_bin.1_k119_4280_4 | 4723 | 6816 | + | GH52 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4280_1
Type: TC
Location: 746 - 1672 (+)
Type: TC
Location: 746 - 1672 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4280_2
Type: TC
Location: 1685 - 2617 (+)
Type: TC
Location: 1685 - 2617 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4280_3
Type: TC
Location: 2680 - 4452 (+)
Type: TC
Location: 2680 - 4452 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4280_4
Type: CAZyme
Location: 4723 - 6816 (+)
Type: CAZyme
Location: 4723 - 6816 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.