Cluster: BackhedF_2015_ERR525690_bin.1_CGC134
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_02098
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_41 | 51856 | 53283 | - | 2.A.66.1.32 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_42 | 53705 | 54907 | - | Cons_hypoth95 | MTS | PrmA | Methyltransf_15 | Methyltrans_SAM | Methyltransf_25 | Methyltransf_31 | PUA_3 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_43 | 55148 | 56833 | - | GH13_31 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_44 | 56838 | 57668 | - | 3.A.1.1.45 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_45 | 57668 | 58564 | - | 3.A.1.1.45 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_46 | 58566 | 60035 | - | SBP_bac_1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_47 | 60438 | 61418 | - | LacI |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4276 | BackhedF_2015_ERR525690_bin.1_k119_4276_48 | 61504 | 62847 | - | GH30_2 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_41
Type: TC
Location: 51856 - 53283 (-)
Type: TC
Location: 51856 - 53283 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_42
Type: pfam
Location: 53705 - 54907 (-)
Type: pfam
Location: 53705 - 54907 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_43
Type: CAZyme
Location: 55148 - 56833 (-)
Type: CAZyme
Location: 55148 - 56833 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_44
Type: TC
Location: 56838 - 57668 (-)
Type: TC
Location: 56838 - 57668 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_45
Type: TC
Location: 57668 - 58564 (-)
Type: TC
Location: 57668 - 58564 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_46
Type: STP
Location: 58566 - 60035 (-)
Type: STP
Location: 58566 - 60035 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_47
Type: TF
Location: 60438 - 61418 (-)
Type: TF
Location: 60438 - 61418 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4276_48
Type: CAZyme
Location: 61504 - 62847 (-)
Type: CAZyme
Location: 61504 - 62847 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.