Cluster: BackhedF_2015_ERR525690_bin.1_CGC130
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00009
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_21 | 28981 | 29787 | + | 3.A.1.104.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_22 | 29803 | 31098 | + | 3.A.1.103.6 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_23 | 31186 | 32106 | + | RrnaAD | PCMT | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_24 | 32141 | 35185 | + | GT2 | GT2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_25 | 35221 | 37668 | + | GT2 | GT2 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_26 | 37777 | 40518 | + | YfhO |
| STP | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_27 | 40515 | 41696 | + | Aminotran_1_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_28 | 41689 | 43653 | + | GT2 | GT2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_29 | 43700 | 44662 | + | GT2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_30 | 44763 | 46163 | + | 9.B.18.1.1 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_31 | 46189 | 46644 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_32 | 46662 | 47627 | + | LytR_cpsA_psr |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4161 | BackhedF_2015_ERR525690_bin.1_k119_4161_33 | 47632 | 48570 | + | GT2 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_21
Type: TC
Location: 28981 - 29787 (+)
Type: TC
Location: 28981 - 29787 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_22
Type: TC
Location: 29803 - 31098 (+)
Type: TC
Location: 29803 - 31098 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_23
Type: pfam
Location: 31186 - 32106 (+)
Type: pfam
Location: 31186 - 32106 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_24
Type: CAZyme
Location: 32141 - 35185 (+)
Type: CAZyme
Location: 32141 - 35185 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_25
Type: CAZyme
Location: 35221 - 37668 (+)
Type: CAZyme
Location: 35221 - 37668 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_26
Type: pfam
Location: 37777 - 40518 (+)
Type: pfam
Location: 37777 - 40518 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_27
Type: STP
Location: 40515 - 41696 (+)
Type: STP
Location: 40515 - 41696 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_28
Type: CAZyme
Location: 41689 - 43653 (+)
Type: CAZyme
Location: 41689 - 43653 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_29
Type: CAZyme
Location: 43700 - 44662 (+)
Type: CAZyme
Location: 43700 - 44662 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_30
Type: TC
Location: 44763 - 46163 (+)
Type: TC
Location: 44763 - 46163 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_31
Type:
Location: 46189 - 46644 (+)
Type:
Location: 46189 - 46644 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_32
Type: pfam
Location: 46662 - 47627 (+)
Type: pfam
Location: 46662 - 47627 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_33
Type: CAZyme
Location: 47632 - 48570 (+)
Type: CAZyme
Location: 47632 - 48570 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.