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Cluster: BackhedF_2015_ERR525690_bin.1_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_24 23912 25435 + 3.A.1.2.20
TC BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_25 25416 26453 + 3.A.1.2.13
STP BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_26 26554 27747 + Peripla_BP_1
pfam BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_27 27778 28815 + URO-D
TC BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_28 29099 30916 + 8.A.59.2.1
TF BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_29 30996 32555 + HTH_AraC | HTH_AraC
CAZyme BackhedF_2015_ERR525690_bin.1_k119_507 BackhedF_2015_ERR525690_bin.1_k119_507_30 32710 33879 + GH25
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_24
Type: TC
Location: 23912 - 25435 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_25
Type: TC
Location: 25416 - 26453 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_26
Type: STP
Location: 26554 - 27747 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_27
Type: pfam
Location: 27778 - 28815 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_28
Type: TC
Location: 29099 - 30916 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_29
Type: TF
Location: 30996 - 32555 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_30
Type: CAZyme
Location: 32710 - 33879 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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