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Cluster: BackhedF_2015_ERR525690_bin.1_CGC129

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4161 BackhedF_2015_ERR525690_bin.1_k119_4161_9 12048 12989 + GT2
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_4161 BackhedF_2015_ERR525690_bin.1_k119_4161_10 13046 14779 + NULL(UNKNOWN)
[View Structural Homologs]
TC BackhedF_2015_ERR525690_bin.1_k119_4161 BackhedF_2015_ERR525690_bin.1_k119_4161_11 15018 16541 + 4.C.1.1.7
pfam BackhedF_2015_ERR525690_bin.1_k119_4161 BackhedF_2015_ERR525690_bin.1_k119_4161_12 16534 17418 + Formyl_trans_N
pfam BackhedF_2015_ERR525690_bin.1_k119_4161 BackhedF_2015_ERR525690_bin.1_k119_4161_13 17421 17654 + PP-binding
TC BackhedF_2015_ERR525690_bin.1_k119_4161 BackhedF_2015_ERR525690_bin.1_k119_4161_14 17658 19256 + 2.A.50.2.1
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_9
Type: CAZyme
Location: 12048 - 12989 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_10
Type:
Location: 13046 - 14779 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_11
Type: TC
Location: 15018 - 16541 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_12
Type: pfam
Location: 16534 - 17418 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_13
Type: pfam
Location: 17421 - 17654 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4161_14
Type: TC
Location: 17658 - 19256 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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