Cluster: BackhedF_2015_ERR525690_bin.1_CGC128
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_03472
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_88 | 104435 | 106237 | + | 3.A.16.1.1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_89 | 106560 | 108695 | + | CBM34 | GH13_39 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_90 | 108959 | 110380 | + | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_91 | 110506 | 111408 | + | 3.A.1.1.7 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_92 | 111412 | 112260 | + | 3.A.1.1.34 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_93 | 112377 | 114209 | + | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_94 | 114210 | 115769 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_95 | 116102 | 117094 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4113 | BackhedF_2015_ERR525690_bin.1_k119_4113_96 | 117477 | 119585 | + | GH3 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_88
Type: TC
Location: 104435 - 106237 (+)
Type: TC
Location: 104435 - 106237 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_89
Type: CAZyme
Location: 106560 - 108695 (+)
Type: CAZyme
Location: 106560 - 108695 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_90
Type: TC
Location: 108959 - 110380 (+)
Type: TC
Location: 108959 - 110380 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_91
Type: TC
Location: 110506 - 111408 (+)
Type: TC
Location: 110506 - 111408 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_92
Type: TC
Location: 111412 - 112260 (+)
Type: TC
Location: 111412 - 112260 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_93
Type: TC
Location: 112377 - 114209 (+)
Type: TC
Location: 112377 - 114209 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_94
Type: TF
Location: 114210 - 115769 (+)
Type: TF
Location: 114210 - 115769 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_95
Type:
Location: 116102 - 117094 (+)
Type:
Location: 116102 - 117094 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_96
Type: CAZyme
Location: 117477 - 119585 (+)
Type: CAZyme
Location: 117477 - 119585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.