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Cluster: BackhedF_2015_ERR525690_bin.1_CGC127

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_50 61605 63767 + GH3
TF BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_51 63834 64745 - HTH_AraC | HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_52 65118 65867 + 3.A.1.16.4
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_53 65953 67497 + 4.C.1.1.4
pfam BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_54 67494 68618 + OpuAC | NMT1 | Phosphonate-bd | NMT1_2
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_55 68637 69422 + 3.A.1.17.4
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_50
Type: CAZyme
Location: 61605 - 63767 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_51
Type: TF
Location: 63834 - 64745 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_52
Type: TC
Location: 65118 - 65867 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_53
Type: TC
Location: 65953 - 67497 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_54
Type: pfam
Location: 67494 - 68618 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_55
Type: TC
Location: 68637 - 69422 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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