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Cluster: BackhedF_2015_ERR525690_bin.1_CGC125

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_13 11373 12221 + 3.A.1.132.1
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_14 12233 12988 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_15 13002 13754 + NULL(UNKNOWN)
[View Structural Homologs]
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_16 13910 14845 - 2.A.19.5.2
pfam BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_17 15028 15735 + PseudoU_synth_2
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_18 15936 16985 + 2.A.86.1.3
TF BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_19 17107 18711 + HTH_AraC | HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_20 18715 20523 + 8.A.59.2.1
STP BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_21 20510 21496 + Peripla_BP_1
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_22 21773 23266 + 3.A.1.2.20
TC BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_23 23285 24274 + 3.A.1.2.11
pfam BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_24 24367 25572 + Peripla_BP_1 | Peripla_BP_4
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4113 BackhedF_2015_ERR525690_bin.1_k119_4113_25 25775 31864 + GH29
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_13
Type: TC
Location: 11373 - 12221 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_14
Type:
Location: 12233 - 12988 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_15
Type:
Location: 13002 - 13754 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_16
Type: TC
Location: 13910 - 14845 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_17
Type: pfam
Location: 15028 - 15735 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_18
Type: TC
Location: 15936 - 16985 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_19
Type: TF
Location: 17107 - 18711 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_20
Type: TC
Location: 18715 - 20523 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_21
Type: STP
Location: 20510 - 21496 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_22
Type: TC
Location: 21773 - 23266 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_23
Type: TC
Location: 23285 - 24274 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_24
Type: pfam
Location: 24367 - 25572 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4113_25
Type: CAZyme
Location: 25775 - 31864 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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