Cluster: BackhedF_2015_ERR525690_bin.1_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00635
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_450 | BackhedF_2015_ERR525690_bin.1_k119_450_1 | 153 | 1925 | + | 9.B.33.1.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_450 | BackhedF_2015_ERR525690_bin.1_k119_450_2 | 2006 | 3493 | + | HTH_AraC | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_450 | BackhedF_2015_ERR525690_bin.1_k119_450_3 | 3671 | 6823 | + | GH106 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_450_1
Type: TC
Location: 153 - 1925 (+)
Type: TC
Location: 153 - 1925 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_450_2
Type: TF
Location: 2006 - 3493 (+)
Type: TF
Location: 2006 - 3493 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_450_3
Type: CAZyme
Location: 3671 - 6823 (+)
Type: CAZyme
Location: 3671 - 6823 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.