Cluster: BackhedF_2015_ERR525690_bin.1_CGC118
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_02633
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_2 | 1019 | 3166 | - | GH3 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_3 | 3198 | 5537 | - | GH31_3 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_4 | 5815 | 7623 | + | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_5 | 7620 | 9167 | + | HTH_AraC | HTH_AraC |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_6 | 9340 | 9990 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_7 | 10192 | 11574 | - | GH42 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_8 | 11706 | 12212 | - | Glyco_hydro_42 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_9 | 12255 | 14042 | - | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_10 | 14119 | 15036 | - | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_11 | 15056 | 16006 | - | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_12 | 16265 | 16888 | + | 9.B.28.1.2 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_13 | 17079 | 18587 | - | IMPDH | CBS |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3768 | BackhedF_2015_ERR525690_bin.1_k119_3768_14 | 18712 | 20307 | - | 2.A.36.6.11 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_2
Type: CAZyme
Location: 1019 - 3166 (-)
Type: CAZyme
Location: 1019 - 3166 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_3
Type: CAZyme
Location: 3198 - 5537 (-)
Type: CAZyme
Location: 3198 - 5537 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_4
Type: TC
Location: 5815 - 7623 (+)
Type: TC
Location: 5815 - 7623 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_5
Type: TF
Location: 7620 - 9167 (+)
Type: TF
Location: 7620 - 9167 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_6
Type: pfam
Location: 9340 - 9990 (-)
Type: pfam
Location: 9340 - 9990 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_7
Type: CAZyme
Location: 10192 - 11574 (-)
Type: CAZyme
Location: 10192 - 11574 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_8
Type: pfam
Location: 11706 - 12212 (-)
Type: pfam
Location: 11706 - 12212 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_9
Type: pfam
Location: 12255 - 14042 (-)
Type: pfam
Location: 12255 - 14042 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_10
Type: TC
Location: 14119 - 15036 (-)
Type: TC
Location: 14119 - 15036 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_11
Type: TC
Location: 15056 - 16006 (-)
Type: TC
Location: 15056 - 16006 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_12
Type: TC
Location: 16265 - 16888 (+)
Type: TC
Location: 16265 - 16888 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_13
Type: pfam
Location: 17079 - 18587 (-)
Type: pfam
Location: 17079 - 18587 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3768_14
Type: TC
Location: 18712 - 20307 (-)
Type: TC
Location: 18712 - 20307 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.