dbCAN Logo

Cluster: BackhedF_2015_ERR525690_bin.1_CGC115

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_16 24243 25133 + 3.A.1.1.42
TC BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_17 25133 25999 + 3.A.1.1.34
CAZyme BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_18 26075 28180 + GH36
TF BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_19 28316 29395 - HTH_AraC
CAZyme BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_20 29658 33740 + GH106
pfam BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_21 33920 34405 + Amidase_6
peptidase BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_22 34749 35702 + M15.UPB
TC BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_23 35949 38399 - 3.A.1.32.3
TF BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_24 38543 39259 + MerR | MerR
pfam BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_25 39325 39609 - Mor
TC BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_26 39947 41395 + 3.A.18.1.1
TF BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_27 41474 42145 + Trans_reg_C
STP BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_28 42259 43266 + HATPase_c | HisKA
TC BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_29 43398 44078 + 3.A.1.125.3
TC BackhedF_2015_ERR525690_bin.1_k119_3632 BackhedF_2015_ERR525690_bin.1_k119_3632_30 44123 44812 + 3.A.1.125.3
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_16
Type: TC
Location: 24243 - 25133 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_17
Type: TC
Location: 25133 - 25999 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_18
Type: CAZyme
Location: 26075 - 28180 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_19
Type: TF
Location: 28316 - 29395 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_20
Type: CAZyme
Location: 29658 - 33740 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_21
Type: pfam
Location: 33920 - 34405 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_22
Type: peptidase
Location: 34749 - 35702 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_23
Type: TC
Location: 35949 - 38399 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_24
Type: TF
Location: 38543 - 39259 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_25
Type: pfam
Location: 39325 - 39609 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_26
Type: TC
Location: 39947 - 41395 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_27
Type: TF
Location: 41474 - 42145 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_28
Type: STP
Location: 42259 - 43266 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_29
Type: TC
Location: 43398 - 44078 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3632_30
Type: TC
Location: 44123 - 44812 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List