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Cluster: BackhedF_2015_ERR525690_bin.1_CGC114

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_71 89427 91877 + GH2
TF BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_72 91885 93096 - HTH_AraC | HTH_AraC
CAZyme BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_73 93297 95684 + GH3
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_74 95713 97098 + 2.A.2.3.2
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_75 97243 98607 + 2.A.1.3.39
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_76 98988 99293 + 3.A.1.21.1
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_71
Type: CAZyme
Location: 89427 - 91877 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_72
Type: TF
Location: 91885 - 93096 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_73
Type: CAZyme
Location: 93297 - 95684 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_74
Type: TC
Location: 95713 - 97098 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_75
Type: TC
Location: 97243 - 98607 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_76
Type: TC
Location: 98988 - 99293 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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