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Cluster: BackhedF_2015_ERR525690_bin.1_CGC113

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_53 67818 68567 - 3.A.1.131.1
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_54 68560 69480 - 3.A.1.131.1
STP BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_55 69606 70511 - HATPase_c | HisKA
TF BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_56 70508 71209 - Trans_reg_C
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_57 71635 73023 + 2.A.66.1.32
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_58 73056 73643 + 2.A.115.2.14
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_59 73780 74694 + NULL(UNKNOWN)
[View Structural Homologs]
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_60 74974 76188 + 2.A.49.9.3
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_61 76223 77422 + 2.A.36.2.1
STP BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_62 77660 78973 + SBP_bac_1
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_63 79078 79992 + 3.A.1.1.34
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_64 79994 80809 + 3.A.1.1.39
TF BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_65 80923 82449 + HTH_AraC | HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_66 82469 84151 + 8.A.59.2.1
CAZyme BackhedF_2015_ERR525690_bin.1_k119_3612 BackhedF_2015_ERR525690_bin.1_k119_3612_67 84239 86218 + GH42
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_53
Type: TC
Location: 67818 - 68567 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_54
Type: TC
Location: 68560 - 69480 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_55
Type: STP
Location: 69606 - 70511 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_56
Type: TF
Location: 70508 - 71209 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_57
Type: TC
Location: 71635 - 73023 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_58
Type: TC
Location: 73056 - 73643 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_59
Type:
Location: 73780 - 74694 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_60
Type: TC
Location: 74974 - 76188 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_61
Type: TC
Location: 76223 - 77422 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_62
Type: STP
Location: 77660 - 78973 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_63
Type: TC
Location: 79078 - 79992 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_64
Type: TC
Location: 79994 - 80809 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_65
Type: TF
Location: 80923 - 82449 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_66
Type: TC
Location: 82469 - 84151 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3612_67
Type: CAZyme
Location: 84239 - 86218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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