Cluster: BackhedF_2015_ERR525690_bin.1_CGC112
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3557 | BackhedF_2015_ERR525690_bin.1_k119_3557_3 | 2707 | 4281 | - | GH29 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3557 | BackhedF_2015_ERR525690_bin.1_k119_3557_4 | 4389 | 5432 | - | 0035607 | 0035607 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3557 | BackhedF_2015_ERR525690_bin.1_k119_3557_5 | 5481 | 7277 | - | 8.A.59.2.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3557 | BackhedF_2015_ERR525690_bin.1_k119_3557_6 | 7359 | 8183 | - | 3.A.1.1.25 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3557 | BackhedF_2015_ERR525690_bin.1_k119_3557_7 | 8197 | 9069 | - | 3.A.1.1.21 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3557_3
Type: CAZyme
Location: 2707 - 4281 (-)
Type: CAZyme
Location: 2707 - 4281 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3557_4
Type: TF
Location: 4389 - 5432 (-)
Type: TF
Location: 4389 - 5432 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3557_5
Type: TC
Location: 5481 - 7277 (-)
Type: TC
Location: 5481 - 7277 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3557_6
Type: TC
Location: 7359 - 8183 (-)
Type: TC
Location: 7359 - 8183 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3557_7
Type: TC
Location: 8197 - 9069 (-)
Type: TC
Location: 8197 - 9069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.