Cluster: BackhedF_2015_ERR525690_bin.1_CGC106
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_07565
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_55 | 80320 | 81825 | + | 3.A.1.2.2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_56 | 81822 | 82850 | + | 3.A.1.2.18 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_57 | 83089 | 84225 | + | Peripla_BP_1 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_58 | 84253 | 85326 | + | URO-D |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_59 | 85416 | 91772 | + | GH2 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_55
Type: TC
Location: 80320 - 81825 (+)
Type: TC
Location: 80320 - 81825 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_56
Type: TC
Location: 81822 - 82850 (+)
Type: TC
Location: 81822 - 82850 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_57
Type: STP
Location: 83089 - 84225 (+)
Type: STP
Location: 83089 - 84225 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_58
Type: pfam
Location: 84253 - 85326 (+)
Type: pfam
Location: 84253 - 85326 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_59
Type: CAZyme
Location: 85416 - 91772 (+)
Type: CAZyme
Location: 85416 - 91772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.