Cluster: BackhedF_2015_ERR525690_bin.1_CGC105
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_01599
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_33 | 50968 | 53985 | + | GH106 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_34 | 54164 | 56374 | - | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_35 | 56664 | 58013 | + | GH1 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_36 | 58083 | 59177 | + | URO-D |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_37 | 59426 | 61018 | + | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_38 | 61136 | 62080 | + | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_39 | 62099 | 63016 | + | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3512 | BackhedF_2015_ERR525690_bin.1_k119_3512_40 | 63021 | 64505 | - | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_33
Type: CAZyme
Location: 50968 - 53985 (+)
Type: CAZyme
Location: 50968 - 53985 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_34
Type: TF
Location: 54164 - 56374 (-)
Type: TF
Location: 54164 - 56374 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_35
Type: CAZyme
Location: 56664 - 58013 (+)
Type: CAZyme
Location: 56664 - 58013 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_36
Type: pfam
Location: 58083 - 59177 (+)
Type: pfam
Location: 58083 - 59177 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_37
Type: TC
Location: 59426 - 61018 (+)
Type: TC
Location: 59426 - 61018 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_38
Type: TC
Location: 61136 - 62080 (+)
Type: TC
Location: 61136 - 62080 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_39
Type: TC
Location: 62099 - 63016 (+)
Type: TC
Location: 62099 - 63016 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3512_40
Type: TC
Location: 63021 - 64505 (-)
Type: TC
Location: 63021 - 64505 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.