Cluster: BackhedF_2015_ERR525690_bin.1_CGC100
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_03273
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_1 | 336 | 5324 | - | GH141 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_2 | 5704 | 6915 | - | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_3 | 6926 | 8626 | - | DUF3502 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_4 | 8623 | 9513 | - | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3366 | BackhedF_2015_ERR525690_bin.1_k119_3366_5 | 9528 | 10508 | - | 3.A.1.1.10 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_1
Type: CAZyme
Location: 336 - 5324 (-)
Type: CAZyme
Location: 336 - 5324 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_2
Type: pfam
Location: 5704 - 6915 (-)
Type: pfam
Location: 5704 - 6915 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_3
Type: pfam
Location: 6926 - 8626 (-)
Type: pfam
Location: 6926 - 8626 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_4
Type: TC
Location: 8623 - 9513 (-)
Type: TC
Location: 8623 - 9513 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3366_5
Type: TC
Location: 9528 - 10508 (-)
Type: TC
Location: 9528 - 10508 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.