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Cluster: BackhedF_2015_ERR525690_bin.1_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_1 311 1612 - GH27
TC BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_2 1694 2536 - 3.A.1.1.36
TC BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_3 2596 3504 - 3.A.1.1.7
TC BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_4 3525 4886 - 3.A.1.1.44
TF BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_5 5167 6045 + HTH_AraC
pfam BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_6 6229 10332 - FtsX | FtsX | MacB_PCD
TC BackhedF_2015_ERR525690_bin.1_k119_406 BackhedF_2015_ERR525690_bin.1_k119_406_7 10351 11052 - 3.A.1.122.7
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_1
Type: CAZyme
Location: 311 - 1612 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_2
Type: TC
Location: 1694 - 2536 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_3
Type: TC
Location: 2596 - 3504 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_4
Type: TC
Location: 3525 - 4886 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_5
Type: TF
Location: 5167 - 6045 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_6
Type: pfam
Location: 6229 - 10332 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_406_7
Type: TC
Location: 10351 - 11052 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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