Cluster: BackhedF_2015_ERR525690_bin.1_CGC1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_03465
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_8 | 9732 | 10619 | + | 3.A.1.1.2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_9 | 10804 | 11679 | + | 3.A.1.1.34 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_10 | 11704 | 12648 | + | BcrAD_BadFG |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_11 | 12645 | 13526 | + | ROK |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_12 | 13510 | 14844 | + | GH4 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_13 | 14841 | 15803 | + | Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_14 | 15870 | 16580 | + | PIG-L |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_15 | 16678 | 17817 | + | GH171 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_227 | BackhedF_2015_ERR525690_bin.1_k119_227_16 | 17844 | 19376 | + | GH3 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_8
Type: TC
Location: 9732 - 10619 (+)
Type: TC
Location: 9732 - 10619 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_9
Type: TC
Location: 10804 - 11679 (+)
Type: TC
Location: 10804 - 11679 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_10
Type: pfam
Location: 11704 - 12648 (+)
Type: pfam
Location: 11704 - 12648 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_11
Type: pfam
Location: 12645 - 13526 (+)
Type: pfam
Location: 12645 - 13526 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_12
Type: CAZyme
Location: 13510 - 14844 (+)
Type: CAZyme
Location: 13510 - 14844 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_13
Type: pfam
Location: 14841 - 15803 (+)
Type: pfam
Location: 14841 - 15803 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_14
Type: STP
Location: 15870 - 16580 (+)
Type: STP
Location: 15870 - 16580 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_15
Type: CAZyme
Location: 16678 - 17817 (+)
Type: CAZyme
Location: 16678 - 17817 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_227_16
Type: CAZyme
Location: 17844 - 19376 (+)
Type: CAZyme
Location: 17844 - 19376 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.