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Cluster: BF369_101_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_149324 k141_149324_112 112158 113129 + GT2
CAZyme k141_149324 k141_149324_113 113131 114090 + GT2
CAZyme k141_149324 k141_149324_114 114103 114960 + GT2
TC k141_149324 k141_149324_115 115012 116415 + 9.B.18.1.1
pfam k141_149324 k141_149324_116 116571 119213 + tRNA_anti-codon | Rep_fac-A_C
pfam k141_149324 k141_149324_117 119236 120171 + RecA | ATPase | Rad51 | HHH_2 | AAA_25 | HHH_5
TC k141_149324 k141_149324_118 120232 121137 + 2.A.69.4.3
Gene ID: k141_149324_112
Type: CAZyme
Location: 112158 - 113129 (+)
Gene ID: k141_149324_113
Type: CAZyme
Location: 113131 - 114090 (+)
Gene ID: k141_149324_114
Type: CAZyme
Location: 114103 - 114960 (+)
Gene ID: k141_149324_115
Type: TC
Location: 115012 - 116415 (+)
Gene ID: k141_149324_116
Type: pfam
Location: 116571 - 119213 (+)
Gene ID: k141_149324_117
Type: pfam
Location: 119236 - 120171 (+)
Gene ID: k141_149324_118
Type: TC
Location: 120232 - 121137 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_149324_117 vegan > vegetarian 22.74545 0.03894

🧭 Explore Read Mapping of CGC

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