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Cluster: BF368_29_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_24518 k141_24518_26 24211 25668 + GH77
TC k141_24518 k141_24518_27 25665 26300 + 2.A.115.1.2
pfam k141_24518 k141_24518_28 26454 28556 + SLH | SLH | SLH
pfam k141_24518 k141_24518_29 28653 29303 - PhoU | PhoU
TC k141_24518 k141_24518_30 29303 30058 - 3.A.1.7.5
TC k141_24518 k141_24518_31 30055 30921 - 3.A.1.7.2
TC k141_24518 k141_24518_32 30914 31780 - 3.A.1.7.1
pfam k141_24518 k141_24518_33 31853 32671 - PBP_like | PBP_like_2 | SBP_bac_11
TC k141_24518 k141_24518_34 32826 33389 - 3.A.1.10.5
Gene ID: k141_24518_26
Type: CAZyme
Location: 24211 - 25668 (+)
Gene ID: k141_24518_27
Type: TC
Location: 25665 - 26300 (+)
Gene ID: k141_24518_28
Type: pfam
Location: 26454 - 28556 (+)
Gene ID: k141_24518_29
Type: pfam
Location: 28653 - 29303 (-)
Gene ID: k141_24518_30
Type: TC
Location: 29303 - 30058 (-)
Gene ID: k141_24518_31
Type: TC
Location: 30055 - 30921 (-)
Gene ID: k141_24518_32
Type: TC
Location: 30914 - 31780 (-)
Gene ID: k141_24518_33
Type: pfam
Location: 31853 - 32671 (-)
Gene ID: k141_24518_34
Type: TC
Location: 32826 - 33389 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_24518_31 vegetarian > vegan 1.00433 0.02677

🧭 Explore Read Mapping of CGC

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