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Cluster: BF353_bin.62_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_423115 k141_423115_224 260000 260707 + 3.A.1.147.6
NULL(UNKNOWN) k141_423115 k141_423115_225 260707 262299 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_423115 k141_423115_226 262348 262701 + ACT_7
CAZyme k141_423115 k141_423115_227 262714 265143 + GH38
pfam k141_423115 k141_423115_228 265187 265798 - TPK_catalytic | TPK_B1_binding
TF k141_423115 k141_423115_229 265909 266181 - HTH_3
TC k141_423115 k141_423115_230 266304 267689 - 2.A.40.1.2
STP k141_423115 k141_423115_231 267740 268270 - Pribosyltran
pfam k141_423115 k141_423115_232 268498 269373 - RNase_T
CAZyme k141_423115 k141_423115_233 269740 270429 + GT32
Gene ID: k141_423115_224
Type: TC
Location: 260000 - 260707 (+)
Gene ID: k141_423115_225
Type:
Location: 260707 - 262299 (+)
Gene ID: k141_423115_226
Type: pfam
Location: 262348 - 262701 (+)
Gene ID: k141_423115_227
Type: CAZyme
Location: 262714 - 265143 (+)
Gene ID: k141_423115_228
Type: pfam
Location: 265187 - 265798 (-)
Gene ID: k141_423115_229
Type: TF
Location: 265909 - 266181 (-)
Gene ID: k141_423115_230
Type: TC
Location: 266304 - 267689 (-)
Gene ID: k141_423115_231
Type: STP
Location: 267740 - 268270 (-)
Gene ID: k141_423115_232
Type: pfam
Location: 268498 - 269373 (-)
Gene ID: k141_423115_233
Type: CAZyme
Location: 269740 - 270429 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_423115_230 vegetarian > omnivore 1.17758 0.04425

🧭 Explore Read Mapping of CGC

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