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Cluster: BF353_47_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_606378 k141_606378_5 7107 7859 + 9.B.18.1.2
pfam k141_606378 k141_606378_6 7980 8816 + HpcH_HpaI
CAZyme k141_606378 k141_606378_7 8859 10022 + GT4
CAZyme k141_606378 k141_606378_8 10034 11008 + GT2
NULL(UNKNOWN) k141_606378 k141_606378_9 11033 12433 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_606378 k141_606378_10 12470 13405 + Ldh_2
CAZyme k141_606378 k141_606378_11 13526 14785 + GT4
pfam k141_606378 k141_606378_12 14788 15843 + EpsG
CAZyme k141_606378 k141_606378_13 15859 16980 + GT4
Gene ID: k141_606378_5
Type: TC
Location: 7107 - 7859 (+)
Gene ID: k141_606378_6
Type: pfam
Location: 7980 - 8816 (+)
Gene ID: k141_606378_7
Type: CAZyme
Location: 8859 - 10022 (+)
Gene ID: k141_606378_8
Type: CAZyme
Location: 10034 - 11008 (+)
Gene ID: k141_606378_9
Type:
Location: 11033 - 12433 (+)
Gene ID: k141_606378_10
Type: pfam
Location: 12470 - 13405 (+)
Gene ID: k141_606378_11
Type: CAZyme
Location: 13526 - 14785 (+)
Gene ID: k141_606378_12
Type: pfam
Location: 14788 - 15843 (+)
Gene ID: k141_606378_13
Type: CAZyme
Location: 15859 - 16980 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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