Cluster: BF346_bin.43_CGC2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BF346_bin.43
- CGC Family ID: CGCFAM_00182
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_81107 | k141_81107_3 | 1458 | 2675 | - | GT4 |
| pfam | k141_81107 | k141_81107_4 | 2690 | 3454 | - | BcrAD_BadFG |
| pfam | k141_81107 | k141_81107_5 | 3505 | 4668 | - | HGD-D |
| TC | k141_81107 | k141_81107_6 | 4745 | 5530 | - | 3.A.1.5.36 |
| TC | k141_81107 | k141_81107_7 | 5517 | 6515 | - | 3.A.1.5.35 |
| TC | k141_81107 | k141_81107_8 | 6519 | 7346 | - | 3.A.1.5.39 |
| TC | k141_81107 | k141_81107_9 | 7346 | 8299 | - | 3.A.1.5.39 |
| TC | k141_81107 | k141_81107_10 | 8389 | 10002 | - | 3.A.1.5.11 |
Gene ID: k141_81107_3
Type: CAZyme
Location: 1458 - 2675 (-)
Type: CAZyme
Location: 1458 - 2675 (-)
Gene ID: k141_81107_4
Type: pfam
Location: 2690 - 3454 (-)
Type: pfam
Location: 2690 - 3454 (-)
Gene ID: k141_81107_5
Type: pfam
Location: 3505 - 4668 (-)
Type: pfam
Location: 3505 - 4668 (-)
Gene ID: k141_81107_6
Type: TC
Location: 4745 - 5530 (-)
Type: TC
Location: 4745 - 5530 (-)
Gene ID: k141_81107_7
Type: TC
Location: 5517 - 6515 (-)
Type: TC
Location: 5517 - 6515 (-)
Gene ID: k141_81107_8
Type: TC
Location: 6519 - 7346 (-)
Type: TC
Location: 6519 - 7346 (-)
Gene ID: k141_81107_9
Type: TC
Location: 7346 - 8299 (-)
Type: TC
Location: 7346 - 8299 (-)
Gene ID: k141_81107_10
Type: TC
Location: 8389 - 10002 (-)
Type: TC
Location: 8389 - 10002 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_81107_3 | vegan > omnivore | 1.72644 | 0.01165 |
| k141_81107_6 | vegan > omnivore | 3.15239 | 0.01165 |
| k141_81107_7 | vegan > omnivore | 1.65868 | 0.01165 |
| k141_81107_8 | vegan > omnivore | 3.25002 | 0.01165 |
| k141_81107_9 | vegan > omnivore | 3.16731 | 0.01165 |
| k141_81107_10 | vegan > omnivore | 2.81510 | 0.01165 |