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Cluster: BF336_113_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_332732 k141_332732_13 20631 21542 + GH16_25
TF k141_332732 k141_332732_14 21539 22885 + GntR | GntR
pfam k141_332732 k141_332732_15 22931 23524 + DUF1007
TC k141_332732 k141_332732_16 23499 24488 + 2.A.113.1.14
TC k141_332732 k141_332732_17 24521 25300 + 2.A.5.5.2
pfam k141_332732 k141_332732_18 25419 25841 + Flavodoxin_1
NULL(UNKNOWN) k141_332732 k141_332732_19 26011 26229 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_332732 k141_332732_20 26264 28375 + 3.A.3.32.5
NULL(UNKNOWN) k141_332732 k141_332732_21 28491 28787 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_332732 k141_332732_22 28832 29467 - Hexapep | Hexapep_2
TC k141_332732 k141_332732_23 29566 29730 - 3.A.1.210.6
Gene ID: k141_332732_13
Type: CAZyme
Location: 20631 - 21542 (+)
Gene ID: k141_332732_14
Type: TF
Location: 21539 - 22885 (+)
Gene ID: k141_332732_15
Type: pfam
Location: 22931 - 23524 (+)
Gene ID: k141_332732_16
Type: TC
Location: 23499 - 24488 (+)
Gene ID: k141_332732_17
Type: TC
Location: 24521 - 25300 (+)
Gene ID: k141_332732_18
Type: pfam
Location: 25419 - 25841 (+)
Gene ID: k141_332732_19
Type:
Location: 26011 - 26229 (+)
Gene ID: k141_332732_20
Type: TC
Location: 26264 - 28375 (+)
Gene ID: k141_332732_21
Type:
Location: 28491 - 28787 (-)
Gene ID: k141_332732_22
Type: pfam
Location: 28832 - 29467 (-)
Gene ID: k141_332732_23
Type: TC
Location: 29566 - 29730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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