Cluster: BF312_bin.23_CGC28
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: BF312_bin.23
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_135980 | k141_135980_46 | 48373 | 49704 | + | 2.A.66.1.37 |
| TC | k141_135980 | k141_135980_47 | 49747 | 51891 | - | 2.A.53.1.8 |
| TF | k141_135980 | k141_135980_48 | 52093 | 52959 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | k141_135980 | k141_135980_49 | 53048 | 53251 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_135980 | k141_135980_50 | 53448 | 54824 | - | 2.A.2.3.2 |
| pfam | k141_135980 | k141_135980_51 | 54851 | 55828 | - | AP_endonuc_2 |
| pfam | k141_135980 | k141_135980_52 | 55844 | 56275 | - | CGDB |
| CAZyme | k141_135980 | k141_135980_53 | 56310 | 57413 | - | GH179 |
| CAZyme | k141_135980 | k141_135980_54 | 57691 | 58737 | - | GH179 |
| pfam | k141_135980 | k141_135980_55 | 58756 | 59670 | - | AP_endonuc_2 |
| CAZyme | k141_135980 | k141_135980_56 | 59872 | 62277 | - | GH39 |
| NULL(UNKNOWN) | k141_135980 | k141_135980_57 | 62417 | 62563 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_135980 | k141_135980_58 | 62544 | 62759 | - | HTH_3 |
| TC | k141_135980 | k141_135980_59 | 63022 | 64179 | + | 2.A.45.2.6 |
Gene ID: k141_135980_46
Type: TC
Location: 48373 - 49704 (+)
Type: TC
Location: 48373 - 49704 (+)
Gene ID: k141_135980_47
Type: TC
Location: 49747 - 51891 (-)
Type: TC
Location: 49747 - 51891 (-)
Gene ID: k141_135980_48
Type: TF
Location: 52093 - 52959 (+)
Type: TF
Location: 52093 - 52959 (+)
Gene ID: k141_135980_49
Type:
Location: 53048 - 53251 (-)
Type:
Location: 53048 - 53251 (-)
Gene ID: k141_135980_50
Type: TC
Location: 53448 - 54824 (-)
Type: TC
Location: 53448 - 54824 (-)
Gene ID: k141_135980_51
Type: pfam
Location: 54851 - 55828 (-)
Type: pfam
Location: 54851 - 55828 (-)
Gene ID: k141_135980_52
Type: pfam
Location: 55844 - 56275 (-)
Type: pfam
Location: 55844 - 56275 (-)
Gene ID: k141_135980_53
Type: CAZyme
Location: 56310 - 57413 (-)
Type: CAZyme
Location: 56310 - 57413 (-)
Gene ID: k141_135980_54
Type: CAZyme
Location: 57691 - 58737 (-)
Type: CAZyme
Location: 57691 - 58737 (-)
Gene ID: k141_135980_55
Type: pfam
Location: 58756 - 59670 (-)
Type: pfam
Location: 58756 - 59670 (-)
Gene ID: k141_135980_56
Type: CAZyme
Location: 59872 - 62277 (-)
Type: CAZyme
Location: 59872 - 62277 (-)
Gene ID: k141_135980_57
Type:
Location: 62417 - 62563 (-)
Type:
Location: 62417 - 62563 (-)
Gene ID: k141_135980_58
Type: TF
Location: 62544 - 62759 (-)
Type: TF
Location: 62544 - 62759 (-)
Gene ID: k141_135980_59
Type: TC
Location: 63022 - 64179 (+)
Type: TC
Location: 63022 - 64179 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Roseburia_A
Species
Roseburia_A sp934359535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_135980_54 | vegetarian > omnivore | 2.07862 | 0.00566 |
| k141_135980_54 | vegetarian > vegan | 3.47699 | 0.03047 |
| k141_135980_55 | vegan > omnivore | 1.61599 | 0.01560 |
| k141_135980_55 | vegetarian > omnivore | 1.28810 | 0.00566 |