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Cluster: BF312_bin.23_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_122126 k141_122126_11 9528 10601 + 3.A.1.11.8
TC k141_122126 k141_122126_12 10594 11418 + 3.A.1.11.8
TC k141_122126 k141_122126_13 11412 12197 + 3.A.1.11.8
TC k141_122126 k141_122126_14 12197 13300 + 3.A.1.11.7
pfam k141_122126 k141_122126_15 13510 14388 + DUF5688
CAZyme k141_122126 k141_122126_16 14445 15896 - GT5
STP k141_122126 k141_122126_17 15997 16794 - Response_reg | Spo0A_C
NULL(UNKNOWN) k141_122126 k141_122126_18 16932 18668 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_122126 k141_122126_19 18797 20647 - 3.A.1.135.6
TC k141_122126 k141_122126_20 20648 22873 - 3.A.1.135.6
TC k141_122126 k141_122126_21 23075 24766 - 9.B.34.1.3
TC k141_122126 k141_122126_22 24786 26183 - 2.A.22.5.3
TF k141_122126 k141_122126_23 26576 27391 - HTH_AraC | HTH_AraC
TC k141_122126 k141_122126_24 27465 28862 - 2.A.2.3.2
CAZyme k141_122126 k141_122126_25 28971 31061 - GH2
Gene ID: k141_122126_11
Type: TC
Location: 9528 - 10601 (+)
Gene ID: k141_122126_12
Type: TC
Location: 10594 - 11418 (+)
Gene ID: k141_122126_13
Type: TC
Location: 11412 - 12197 (+)
Gene ID: k141_122126_14
Type: TC
Location: 12197 - 13300 (+)
Gene ID: k141_122126_15
Type: pfam
Location: 13510 - 14388 (+)
Gene ID: k141_122126_16
Type: CAZyme
Location: 14445 - 15896 (-)
Gene ID: k141_122126_17
Type: STP
Location: 15997 - 16794 (-)
Gene ID: k141_122126_18
Type:
Location: 16932 - 18668 (-)
Gene ID: k141_122126_19
Type: TC
Location: 18797 - 20647 (-)
Gene ID: k141_122126_20
Type: TC
Location: 20648 - 22873 (-)
Gene ID: k141_122126_21
Type: TC
Location: 23075 - 24766 (-)
Gene ID: k141_122126_22
Type: TC
Location: 24786 - 26183 (-)
Gene ID: k141_122126_23
Type: TF
Location: 26576 - 27391 (-)
Gene ID: k141_122126_24
Type: TC
Location: 27465 - 28862 (-)
Gene ID: k141_122126_25
Type: CAZyme
Location: 28971 - 31061 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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