Cluster: BF312_100_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: BF312_100
- CGC Family ID: CGCFAM_04444
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_77323 | k141_77323_2 | 608 | 3298 | + | 9.B.74.1.3 |
| TC | k141_77323 | k141_77323_3 | 3387 | 6005 | - | 3.A.3.2.21 |
| pfam | k141_77323 | k141_77323_4 | 6263 | 7840 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Amidase_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3 |
| CAZyme | k141_77323 | k141_77323_5 | 7931 | 8983 | + | GT2 |
| TC | k141_77323 | k141_77323_6 | 9033 | 10028 | + | 8.A.5.1.6 |
| TC | k141_77323 | k141_77323_7 | 10183 | 11652 | - | 2.A.66.1.32 |
Gene ID: k141_77323_2
Type: TC
Location: 608 - 3298 (+)
Type: TC
Location: 608 - 3298 (+)
Gene ID: k141_77323_3
Type: TC
Location: 3387 - 6005 (-)
Type: TC
Location: 3387 - 6005 (-)
Gene ID: k141_77323_4
Type: pfam
Location: 6263 - 7840 (+)
Type: pfam
Location: 6263 - 7840 (+)
Gene ID: k141_77323_5
Type: CAZyme
Location: 7931 - 8983 (+)
Type: CAZyme
Location: 7931 - 8983 (+)
Gene ID: k141_77323_6
Type: TC
Location: 9033 - 10028 (+)
Type: TC
Location: 9033 - 10028 (+)
Gene ID: k141_77323_7
Type: TC
Location: 10183 - 11652 (-)
Type: TC
Location: 10183 - 11652 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus_C
Species
Ruminococcus_C sp934463425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_77323_2 | vegan > omnivore | 1.60865 | 0.00230 |
| k141_77323_2 | vegetarian > omnivore | 1.62054 | 0.00214 |
| k141_77323_5 | vegan > omnivore | 2.24377 | 0.00230 |
| k141_77323_5 | vegetarian > omnivore | 2.86580 | 0.00214 |