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Cluster: BF312_100_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_214257 k141_214257_5 4353 5561 + 2.A.4.7.6
pfam k141_214257 k141_214257_6 5661 7166 - GalP_UDP_transf | GalP_UDP_tr_C
CAZyme k141_214257 k141_214257_7 7182 8666 - GH43_35
CAZyme k141_214257 k141_214257_8 8889 12398 - CBM22 | CBM22 | CBM9 | GH10
STP k141_214257 k141_214257_9 12592 13092 + NUDIX
CAZyme k141_214257 k141_214257_10 13181 14812 - GH5_1
TF k141_214257 k141_214257_11 15153 16160 + LacI
STP k141_214257 k141_214257_12 16649 17866 + SBP_bac_1
TC k141_214257 k141_214257_13 17911 18867 + 3.A.1.1.28
TC k141_214257 k141_214257_14 18864 19715 + 3.A.1.1.27
CAZyme k141_214257 k141_214257_15 19732 20751 + GH130_2
pfam k141_214257 k141_214257_16 20767 21999 + GlcNAc_2-epim
CAZyme k141_214257 k141_214257_17 22225 23106 + GH130_1
CAZyme k141_214257 k141_214257_18 24122 26902 - CBM13 | CBM13 | PL1
Gene ID: k141_214257_5
Type: TC
Location: 4353 - 5561 (+)
Gene ID: k141_214257_6
Type: pfam
Location: 5661 - 7166 (-)
Gene ID: k141_214257_7
Type: CAZyme
Location: 7182 - 8666 (-)
Gene ID: k141_214257_8
Type: CAZyme
Location: 8889 - 12398 (-)
Gene ID: k141_214257_9
Type: STP
Location: 12592 - 13092 (+)
Gene ID: k141_214257_10
Type: CAZyme
Location: 13181 - 14812 (-)
Gene ID: k141_214257_11
Type: TF
Location: 15153 - 16160 (+)
Gene ID: k141_214257_12
Type: STP
Location: 16649 - 17866 (+)
Gene ID: k141_214257_13
Type: TC
Location: 17911 - 18867 (+)
Gene ID: k141_214257_14
Type: TC
Location: 18864 - 19715 (+)
Gene ID: k141_214257_15
Type: CAZyme
Location: 19732 - 20751 (+)
Gene ID: k141_214257_16
Type: pfam
Location: 20767 - 21999 (+)
Gene ID: k141_214257_17
Type: CAZyme
Location: 22225 - 23106 (+)
Gene ID: k141_214257_18
Type: CAZyme
Location: 24122 - 26902 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_214257_7 vegan > omnivore 1.68886 0.00230
k141_214257_7 vegetarian > omnivore 1.66153 0.00214
k141_214257_9 vegan > omnivore 1.15122 0.00230
k141_214257_12 vegan > omnivore 2.05735 0.00230
k141_214257_12 vegetarian > omnivore 1.85486 0.00214
k141_214257_13 vegan > omnivore 1.77630 0.00230
k141_214257_14 vegan > omnivore 2.11823 0.00230
k141_214257_14 vegetarian > omnivore 1.43925 0.00214

🧭 Explore Read Mapping of CGC

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