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Cluster: BF312_100_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_34745 k141_34745_23 20744 21895 - GT4
CAZyme k141_34745 k141_34745_24 21888 23039 - GT4
pfam k141_34745 k141_34745_25 23132 24166 - Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
pfam k141_34745 k141_34745_26 24227 25303 - NTP_transferase | NTP_transf_3 | ManC_GMP_beta-helix
TC k141_34745 k141_34745_27 25300 26721 - 9.B.18.1.3
pfam k141_34745 k141_34745_28 27182 29569 - Cthe_2159 | Cthe_2159 | Cthe_2159
TC k141_34745 k141_34745_29 29926 31524 - 9.B.160.1.10
Gene ID: k141_34745_23
Type: CAZyme
Location: 20744 - 21895 (-)
Gene ID: k141_34745_24
Type: CAZyme
Location: 21888 - 23039 (-)
Gene ID: k141_34745_25
Type: pfam
Location: 23132 - 24166 (-)
Gene ID: k141_34745_26
Type: pfam
Location: 24227 - 25303 (-)
Gene ID: k141_34745_27
Type: TC
Location: 25300 - 26721 (-)
Gene ID: k141_34745_28
Type: pfam
Location: 27182 - 29569 (-)
Gene ID: k141_34745_29
Type: TC
Location: 29926 - 31524 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_34745_27 vegan > omnivore 1.31598 0.00230
k141_34745_27 vegetarian > omnivore 1.24147 0.00214
k141_34745_28 vegan > omnivore 1.41827 0.00230
k141_34745_28 vegetarian > omnivore 1.97965 0.00214

🧭 Explore Read Mapping of CGC

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