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Cluster: BF294_bin.1_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_305640 k141_305640_3 2642 4036 - 2.A.3.1.13
STP k141_305640 k141_305640_4 4221 5117 - FmdA_AmdA
CAZyme k141_305640 k141_305640_5 5174 6259 - GT2
pfam k141_305640 k141_305640_6 6435 7430 - PTA_PTB
TC k141_305640 k141_305640_7 7696 8274 + 3.A.1.25.5
TF k141_305640 k141_305640_8 8399 9379 + HTH_11
TC k141_305640 k141_305640_9 9492 11294 - 2.A.114.1.3
Gene ID: k141_305640_3
Type: TC
Location: 2642 - 4036 (-)
Gene ID: k141_305640_4
Type: STP
Location: 4221 - 5117 (-)
Gene ID: k141_305640_5
Type: CAZyme
Location: 5174 - 6259 (-)
Gene ID: k141_305640_6
Type: pfam
Location: 6435 - 7430 (-)
Gene ID: k141_305640_7
Type: TC
Location: 7696 - 8274 (+)
Gene ID: k141_305640_8
Type: TF
Location: 8399 - 9379 (+)
Gene ID: k141_305640_9
Type: TC
Location: 9492 - 11294 (-)

Taxonomic Lineage

Domain
Bacteria
Family
QAMH01

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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