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Cluster: BF294_bin.16_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_130456 k141_130456_1 142 402 + 2.A.27.2.2
TC k141_130456 k141_130456_2 406 1227 + 2.A.27.2.2
NULL(UNKNOWN) k141_130456 k141_130456_3 1332 1553 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_130456 k141_130456_4 1763 2626 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_130456 k141_130456_5 2633 4204 - 2.A.25.1.3
pfam k141_130456 k141_130456_6 4275 5282 - APH
pfam k141_130456 k141_130456_7 5279 6379 - APH
TC k141_130456 k141_130456_8 6376 8193 - 3.A.1.201.22
CAZyme k141_130456 k141_130456_9 8186 9328 - GT4
CAZyme k141_130456 k141_130456_10 9333 10544 - GT4
CAZyme k141_130456 k141_130456_11 10541 11740 - GT1
Gene ID: k141_130456_1
Type: TC
Location: 142 - 402 (+)
Gene ID: k141_130456_2
Type: TC
Location: 406 - 1227 (+)
Gene ID: k141_130456_3
Type:
Location: 1332 - 1553 (+)
Gene ID: k141_130456_4
Type:
Location: 1763 - 2626 (+)
Gene ID: k141_130456_5
Type: TC
Location: 2633 - 4204 (-)
Gene ID: k141_130456_6
Type: pfam
Location: 4275 - 5282 (-)
Gene ID: k141_130456_7
Type: pfam
Location: 5279 - 6379 (-)
Gene ID: k141_130456_8
Type: TC
Location: 6376 - 8193 (-)
Gene ID: k141_130456_9
Type: CAZyme
Location: 8186 - 9328 (-)
Gene ID: k141_130456_10
Type: CAZyme
Location: 9333 - 10544 (-)
Gene ID: k141_130456_11
Type: CAZyme
Location: 10541 - 11740 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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