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Cluster: BF294_50_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_552439 k141_552439_2 352 1083 + 1.C.113.1.3
pfam k141_552439 k141_552439_3 1360 2718 - Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_3 | Choline_bind_3
pfam k141_552439 k141_552439_4 3096 3539 + Tyr_Deacylase
CAZyme k141_552439 k141_552439_5 3777 5036 - GT4
TC k141_552439 k141_552439_6 5167 5715 + 2.A.51.1.6
TC k141_552439 k141_552439_7 5712 6269 + 2.A.51.1.6
pfam k141_552439 k141_552439_8 6392 7876 + tRNA-synt_1c | Anticodon_2
NULL(UNKNOWN) k141_552439 k141_552439_9 8255 8563 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_552439 k141_552439_10 8694 10715 + 3.A.2.2.2
TC k141_552439 k141_552439_11 10715 11191 + 3.A.2.2.2
Gene ID: k141_552439_2
Type: TC
Location: 352 - 1083 (+)
Gene ID: k141_552439_3
Type: pfam
Location: 1360 - 2718 (-)
Gene ID: k141_552439_4
Type: pfam
Location: 3096 - 3539 (+)
Gene ID: k141_552439_5
Type: CAZyme
Location: 3777 - 5036 (-)
Gene ID: k141_552439_6
Type: TC
Location: 5167 - 5715 (+)
Gene ID: k141_552439_7
Type: TC
Location: 5712 - 6269 (+)
Gene ID: k141_552439_8
Type: pfam
Location: 6392 - 7876 (+)
Gene ID: k141_552439_9
Type:
Location: 8255 - 8563 (+)
Gene ID: k141_552439_10
Type: TC
Location: 8694 - 10715 (+)
Gene ID: k141_552439_11
Type: TC
Location: 10715 - 11191 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Avilachnospira
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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