Cluster: BF279_103_CGC18
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 2
- Substrate:
- Genome ID: BF279_103
- CGC Family ID: CGCFAM_07791
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_306479 | k141_306479_20 | 19637 | 20587 | - | 1.A.35.1.1 |
| TF | k141_306479 | k141_306479_21 | 20840 | 21493 | - | GntR |
| pfam | k141_306479 | k141_306479_22 | 21745 | 24186 | + | PHO4 |
| TC | k141_306479 | k141_306479_23 | 24420 | 26033 | + | 1.B.52.2.1 |
| NULL(UNKNOWN) | k141_306479 | k141_306479_24 | 26230 | 26835 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_306479 | k141_306479_25 | 26826 | 27620 | + | CbiA |
| CAZyme | k141_306479 | k141_306479_26 | 27633 | 29738 | + | GT2 |
| pfam | k141_306479 | k141_306479_27 | 29740 | 32208 | + | BcsB |
| TC | k141_306479 | k141_306479_28 | 32226 | 36446 | + | 1.B.55.3.1 |
| pfam | k141_306479 | k141_306479_29 | 36446 | 36892 | + | Cellsynth_D |
| CAZyme | k141_306479 | k141_306479_30 | 37049 | 38053 | + | GH8 |
| pfam | k141_306479 | k141_306479_31 | 38254 | 39108 | + | DAHP_synth_1 |
| pfam | k141_306479 | k141_306479_32 | 39198 | 40013 | - | Lipoprotein_9 |
| TC | k141_306479 | k141_306479_33 | 40080 | 40754 | - | 3.A.1.24.5 |
| TC | k141_306479 | k141_306479_34 | 40751 | 41815 | - | 3.A.1.24.1 |
| peptidase | k141_306479 | k141_306479_35 | 41818 | 42945 | - | M20.UPD |
| TC | k141_306479 | k141_306479_36 | 43491 | 45017 | - | 3.A.7.19.1 |
Gene ID: k141_306479_20
Type: TC
Location: 19637 - 20587 (-)
Type: TC
Location: 19637 - 20587 (-)
Gene ID: k141_306479_21
Type: TF
Location: 20840 - 21493 (-)
Type: TF
Location: 20840 - 21493 (-)
Gene ID: k141_306479_22
Type: pfam
Location: 21745 - 24186 (+)
Type: pfam
Location: 21745 - 24186 (+)
Gene ID: k141_306479_23
Type: TC
Location: 24420 - 26033 (+)
Type: TC
Location: 24420 - 26033 (+)
Gene ID: k141_306479_24
Type:
Location: 26230 - 26835 (+)
Type:
Location: 26230 - 26835 (+)
Gene ID: k141_306479_25
Type: STP
Location: 26826 - 27620 (+)
Type: STP
Location: 26826 - 27620 (+)
Gene ID: k141_306479_26
Type: CAZyme
Location: 27633 - 29738 (+)
Type: CAZyme
Location: 27633 - 29738 (+)
Gene ID: k141_306479_27
Type: pfam
Location: 29740 - 32208 (+)
Type: pfam
Location: 29740 - 32208 (+)
Gene ID: k141_306479_28
Type: TC
Location: 32226 - 36446 (+)
Type: TC
Location: 32226 - 36446 (+)
Gene ID: k141_306479_29
Type: pfam
Location: 36446 - 36892 (+)
Type: pfam
Location: 36446 - 36892 (+)
Gene ID: k141_306479_30
Type: CAZyme
Location: 37049 - 38053 (+)
Type: CAZyme
Location: 37049 - 38053 (+)
Gene ID: k141_306479_31
Type: pfam
Location: 38254 - 39108 (+)
Type: pfam
Location: 38254 - 39108 (+)
Gene ID: k141_306479_32
Type: pfam
Location: 39198 - 40013 (-)
Type: pfam
Location: 39198 - 40013 (-)
Gene ID: k141_306479_33
Type: TC
Location: 40080 - 40754 (-)
Type: TC
Location: 40080 - 40754 (-)
Gene ID: k141_306479_34
Type: TC
Location: 40751 - 41815 (-)
Type: TC
Location: 40751 - 41815 (-)
Gene ID: k141_306479_35
Type: peptidase
Location: 41818 - 42945 (-)
Type: peptidase
Location: 41818 - 42945 (-)
Gene ID: k141_306479_36
Type: TC
Location: 43491 - 45017 (-)
Type: TC
Location: 43491 - 45017 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Succinivibrionaceae
Genus
Succinivibrio
Species
Succinivibrio sp934218695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.