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Cluster: BF269_bin.54_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_131373 k141_131373_179 168633 170507 - 3.A.3.6.10
STP k141_131373 k141_131373_180 170556 170774 - HMA
TF k141_131373 k141_131373_181 170983 171723 + HTH_AraC | HTH_AraC
TC k141_131373 k141_131373_182 171784 172998 - 2.A.1.59.4
TC k141_131373 k141_131373_183 173132 173830 - 9.B.20.1.4
TC k141_131373 k141_131373_184 173834 174559 - 9.B.20.1.4
TC k141_131373 k141_131373_185 175062 175601 - 3.D.1.8.1
pfam k141_131373 k141_131373_186 175604 176041 - SmpB
NULL(UNKNOWN) k141_131373 k141_131373_187 176191 177333 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_131373 k141_131373_188 177499 178527 - GT2
pfam k141_131373 k141_131373_189 178543 179658 - Amino_oxidase | GLF | NAD_binding_8
pfam k141_131373 k141_131373_190 179794 180681 - DNA_processg_A | LDcluster4
TC k141_131373 k141_131373_191 180678 181862 - 3.A.18.1.1
Gene ID: k141_131373_179
Type: TC
Location: 168633 - 170507 (-)
Gene ID: k141_131373_180
Type: STP
Location: 170556 - 170774 (-)
Gene ID: k141_131373_181
Type: TF
Location: 170983 - 171723 (+)
Gene ID: k141_131373_182
Type: TC
Location: 171784 - 172998 (-)
Gene ID: k141_131373_183
Type: TC
Location: 173132 - 173830 (-)
Gene ID: k141_131373_184
Type: TC
Location: 173834 - 174559 (-)
Gene ID: k141_131373_185
Type: TC
Location: 175062 - 175601 (-)
Gene ID: k141_131373_186
Type: pfam
Location: 175604 - 176041 (-)
Gene ID: k141_131373_187
Type:
Location: 176191 - 177333 (-)
Gene ID: k141_131373_188
Type: CAZyme
Location: 177499 - 178527 (-)
Gene ID: k141_131373_189
Type: pfam
Location: 178543 - 179658 (-)
Gene ID: k141_131373_190
Type: pfam
Location: 179794 - 180681 (-)
Gene ID: k141_131373_191
Type: TC
Location: 180678 - 181862 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_131373_180 vegetarian > vegan 1.12469 0.01285

🧭 Explore Read Mapping of CGC

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