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Cluster: BF260_99_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_310003 k141_310003_4 2091 3800 + 8.A.59.2.1
TF k141_310003 k141_310003_5 3797 4987 + HTH_AraC | HTH_AraC
STP k141_310003 k141_310003_6 5066 6724 + SBP_bac_1
TC k141_310003 k141_310003_7 6727 7674 + 3.A.1.1.9
TC k141_310003 k141_310003_8 7685 8632 + 3.A.1.1.9
NULL(UNKNOWN) k141_310003 k141_310003_9 8629 10281 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_310003 k141_310003_10 10403 12019 + Big_2 | Big-like
CAZyme k141_310003 k141_310003_11 12075 13283 + GH37
CAZyme k141_310003 k141_310003_12 13276 15222 + GH3
CAZyme k141_310003 k141_310003_13 15224 16726 + GH31_19
NULL(UNKNOWN) k141_310003 k141_310003_14 16805 17896 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_310003 k141_310003_15 17874 19412 + 3.A.1.1.26
peptidase k141_310003 k141_310003_16 19463 20287 + S09.UPW
TC k141_310003 k141_310003_17 20578 23085 + 3.A.5.1.3
pfam k141_310003 k141_310003_18 23147 24235 + RF-1 | PCRF
TC k141_310003 k141_310003_19 24232 25356 + 2.A.115.1.5
Gene ID: k141_310003_4
Type: TC
Location: 2091 - 3800 (+)
Gene ID: k141_310003_5
Type: TF
Location: 3797 - 4987 (+)
Gene ID: k141_310003_6
Type: STP
Location: 5066 - 6724 (+)
Gene ID: k141_310003_7
Type: TC
Location: 6727 - 7674 (+)
Gene ID: k141_310003_8
Type: TC
Location: 7685 - 8632 (+)
Gene ID: k141_310003_9
Type:
Location: 8629 - 10281 (+)
Gene ID: k141_310003_10
Type: pfam
Location: 10403 - 12019 (+)
Gene ID: k141_310003_11
Type: CAZyme
Location: 12075 - 13283 (+)
Gene ID: k141_310003_12
Type: CAZyme
Location: 13276 - 15222 (+)
Gene ID: k141_310003_13
Type: CAZyme
Location: 15224 - 16726 (+)
Gene ID: k141_310003_14
Type:
Location: 16805 - 17896 (+)
Gene ID: k141_310003_15
Type: TC
Location: 17874 - 19412 (+)
Gene ID: k141_310003_16
Type: peptidase
Location: 19463 - 20287 (+)
Gene ID: k141_310003_17
Type: TC
Location: 20578 - 23085 (+)
Gene ID: k141_310003_18
Type: pfam
Location: 23147 - 24235 (+)
Gene ID: k141_310003_19
Type: TC
Location: 24232 - 25356 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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