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Cluster: BF260_99_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_107005 k141_107005_10 9830 10735 + 3.A.1.1.39
CAZyme k141_107005 k141_107005_11 10741 13020 + GH65
CAZyme k141_107005 k141_107005_12 13017 15113 + GH65
TC k141_107005 k141_107005_13 15114 16943 + 3.A.1.1.26
CAZyme k141_107005 k141_107005_14 16940 18667 + GH28
CAZyme k141_107005 k141_107005_15 18766 21393 + GH28
NULL(UNKNOWN) k141_107005 k141_107005_16 21424 24051 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_107005 k141_107005_17 24116 25312 + HTH_AraC
TC k141_107005 k141_107005_18 25309 27045 + 8.A.59.2.1
Gene ID: k141_107005_10
Type: TC
Location: 9830 - 10735 (+)
Gene ID: k141_107005_11
Type: CAZyme
Location: 10741 - 13020 (+)
Gene ID: k141_107005_12
Type: CAZyme
Location: 13017 - 15113 (+)
Gene ID: k141_107005_13
Type: TC
Location: 15114 - 16943 (+)
Gene ID: k141_107005_14
Type: CAZyme
Location: 16940 - 18667 (+)
Gene ID: k141_107005_15
Type: CAZyme
Location: 18766 - 21393 (+)
Gene ID: k141_107005_16
Type:
Location: 21424 - 24051 (+)
Gene ID: k141_107005_17
Type: TF
Location: 24116 - 25312 (+)
Gene ID: k141_107005_18
Type: TC
Location: 25309 - 27045 (+)

Taxonomic Lineage

Domain
Bacteria
Order
RFN20
Family
CAG-288

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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