Cluster: BF244_bin.23_CGC17
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: BF244_bin.23
- CGC Family ID: CGCFAM_00019
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_204085 | k141_204085_8 | 9035 | 11374 | - | 3.A.3.5.15 |
| TC | k141_204085 | k141_204085_9 | 11779 | 13986 | + | 1.I.1.1.3 |
| STP | k141_204085 | k141_204085_10 | 15158 | 15400 | + | Fer4 | Fer4 |
| TC | k141_204085 | k141_204085_11 | 15743 | 16255 | + | 4.A.1.2.11 |
| pfam | k141_204085 | k141_204085_12 | 16262 | 17128 | + | PRD | PRD | CAT_RBD |
| TC | k141_204085 | k141_204085_13 | 17228 | 18844 | + | 4.A.1.1.3 |
| CAZyme | k141_204085 | k141_204085_14 | 18848 | 20230 | + | GH4 |
| STP | k141_204085 | k141_204085_15 | 20574 | 22406 | + | Pyr_redox_2 |
| TC | k141_204085 | k141_204085_16 | 22400 | 24211 | + | 3.D.1.5.1 |
| pfam | k141_204085 | k141_204085_17 | 24214 | 25272 | + | NMT1 |
| TC | k141_204085 | k141_204085_18 | 25276 | 26652 | + | 3.A.1.17.10 |
Gene ID: k141_204085_8
Type: TC
Location: 9035 - 11374 (-)
Type: TC
Location: 9035 - 11374 (-)
Gene ID: k141_204085_9
Type: TC
Location: 11779 - 13986 (+)
Type: TC
Location: 11779 - 13986 (+)
Gene ID: k141_204085_10
Type: STP
Location: 15158 - 15400 (+)
Type: STP
Location: 15158 - 15400 (+)
Gene ID: k141_204085_11
Type: TC
Location: 15743 - 16255 (+)
Type: TC
Location: 15743 - 16255 (+)
Gene ID: k141_204085_12
Type: pfam
Location: 16262 - 17128 (+)
Type: pfam
Location: 16262 - 17128 (+)
Gene ID: k141_204085_13
Type: TC
Location: 17228 - 18844 (+)
Type: TC
Location: 17228 - 18844 (+)
Gene ID: k141_204085_14
Type: CAZyme
Location: 18848 - 20230 (+)
Type: CAZyme
Location: 18848 - 20230 (+)
Gene ID: k141_204085_15
Type: STP
Location: 20574 - 22406 (+)
Type: STP
Location: 20574 - 22406 (+)
Gene ID: k141_204085_16
Type: TC
Location: 22400 - 24211 (+)
Type: TC
Location: 22400 - 24211 (+)
Gene ID: k141_204085_17
Type: pfam
Location: 24214 - 25272 (+)
Type: pfam
Location: 24214 - 25272 (+)
Gene ID: k141_204085_18
Type: TC
Location: 25276 - 26652 (+)
Type: TC
Location: 25276 - 26652 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_204085_17 | vegan > omnivore | 1.11857 | 0.02059 |
| k141_204085_18 | vegan > omnivore | 1.24392 | 0.02059 |