Cluster: BF244_bin.23_CGC16
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: BF244_bin.23
- CGC Family ID: CGCFAM_00024
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_92532 | k141_92532_4 | 2636 | 4012 | - | GH13_20 |
| TC | k141_92532 | k141_92532_5 | 4167 | 5363 | - | 2.A.1.2.18 |
| TC | k141_92532 | k141_92532_6 | 5486 | 7846 | - | 9.A.8.1.6 |
| peptidase | k141_92532 | k141_92532_7 | 8033 | 8935 | - | S09.UPW |
| TC | k141_92532 | k141_92532_8 | 9181 | 9744 | + | 4.A.1.2.6 |
| pfam | k141_92532 | k141_92532_9 | 9926 | 11329 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | k141_92532 | k141_92532_10 | 11579 | 12367 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_92532 | k141_92532_11 | 12527 | 13354 | + | 3.A.1.34.1 |
Gene ID: k141_92532_4
Type: CAZyme
Location: 2636 - 4012 (-)
Type: CAZyme
Location: 2636 - 4012 (-)
Gene ID: k141_92532_5
Type: TC
Location: 4167 - 5363 (-)
Type: TC
Location: 4167 - 5363 (-)
Gene ID: k141_92532_6
Type: TC
Location: 5486 - 7846 (-)
Type: TC
Location: 5486 - 7846 (-)
Gene ID: k141_92532_7
Type: peptidase
Location: 8033 - 8935 (-)
Type: peptidase
Location: 8033 - 8935 (-)
Gene ID: k141_92532_8
Type: TC
Location: 9181 - 9744 (+)
Type: TC
Location: 9181 - 9744 (+)
Gene ID: k141_92532_9
Type: pfam
Location: 9926 - 11329 (+)
Type: pfam
Location: 9926 - 11329 (+)
Gene ID: k141_92532_10
Type:
Location: 11579 - 12367 (+)
Type:
Location: 11579 - 12367 (+)
Gene ID: k141_92532_11
Type: TC
Location: 12527 - 13354 (+)
Type: TC
Location: 12527 - 13354 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.