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Cluster: BF236_bin.70_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_285119 k141_285119_2 648 911 + 8.A.8.1.4
pfam k141_285119 k141_285119_3 977 2827 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TF k141_285119 k141_285119_4 2847 4094 + HTH_AraC
TC k141_285119 k141_285119_5 4094 5809 + 8.A.59.2.1
STP k141_285119 k141_285119_6 5793 6761 + Peripla_BP_1
TC k141_285119 k141_285119_7 7087 8145 + 3.A.1.2.3
TC k141_285119 k141_285119_8 8260 9768 + 3.A.1.2.3
TC k141_285119 k141_285119_9 9783 10766 + 3.A.1.2.3
NULL(UNKNOWN) k141_285119 k141_285119_10 10769 10996 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_285119 k141_285119_11 11316 11894 - Flavin_Reduct
CAZyme k141_285119 k141_285119_12 11891 12874 - GT2
Gene ID: k141_285119_2
Type: TC
Location: 648 - 911 (+)
Gene ID: k141_285119_3
Type: pfam
Location: 977 - 2827 (+)
Gene ID: k141_285119_4
Type: TF
Location: 2847 - 4094 (+)
Gene ID: k141_285119_5
Type: TC
Location: 4094 - 5809 (+)
Gene ID: k141_285119_6
Type: STP
Location: 5793 - 6761 (+)
Gene ID: k141_285119_7
Type: TC
Location: 7087 - 8145 (+)
Gene ID: k141_285119_8
Type: TC
Location: 8260 - 9768 (+)
Gene ID: k141_285119_9
Type: TC
Location: 9783 - 10766 (+)
Gene ID: k141_285119_10
Type:
Location: 10769 - 10996 (+)
Gene ID: k141_285119_11
Type: pfam
Location: 11316 - 11894 (-)
Gene ID: k141_285119_12
Type: CAZyme
Location: 11891 - 12874 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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