Cluster: BF236_bin.70_CGC15
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: BF236_bin.70
- CGC Family ID: CGCFAM_07164
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_81916 | k141_81916_7 | 10659 | 11612 | + | 3.A.1.1.10 |
| TC | k141_81916 | k141_81916_8 | 11627 | 12559 | + | 3.A.1.1.10 |
| STP | k141_81916 | k141_81916_9 | 12637 | 14292 | + | SBP_bac_1 |
| CAZyme | k141_81916 | k141_81916_10 | 14399 | 16072 | + | CE12 |
| CAZyme | k141_81916 | k141_81916_11 | 16089 | 18251 | + | GH112 |
| CAZyme | k141_81916 | k141_81916_12 | 18267 | 19748 | + | GH51_1 |
| pfam | k141_81916 | k141_81916_13 | 19745 | 20002 | + | DUF6171 |
| TC | k141_81916 | k141_81916_14 | 20007 | 21371 | + | 2.A.66.1.33 |
| CAZyme | k141_81916 | k141_81916_15 | 21402 | 22451 | + | GH105 |
Gene ID: k141_81916_7
Type: TC
Location: 10659 - 11612 (+)
Type: TC
Location: 10659 - 11612 (+)
Gene ID: k141_81916_8
Type: TC
Location: 11627 - 12559 (+)
Type: TC
Location: 11627 - 12559 (+)
Gene ID: k141_81916_9
Type: STP
Location: 12637 - 14292 (+)
Type: STP
Location: 12637 - 14292 (+)
Gene ID: k141_81916_10
Type: CAZyme
Location: 14399 - 16072 (+)
Type: CAZyme
Location: 14399 - 16072 (+)
Gene ID: k141_81916_11
Type: CAZyme
Location: 16089 - 18251 (+)
Type: CAZyme
Location: 16089 - 18251 (+)
Gene ID: k141_81916_12
Type: CAZyme
Location: 18267 - 19748 (+)
Type: CAZyme
Location: 18267 - 19748 (+)
Gene ID: k141_81916_13
Type: pfam
Location: 19745 - 20002 (+)
Type: pfam
Location: 19745 - 20002 (+)
Gene ID: k141_81916_14
Type: TC
Location: 20007 - 21371 (+)
Type: TC
Location: 20007 - 21371 (+)
Gene ID: k141_81916_15
Type: CAZyme
Location: 21402 - 22451 (+)
Type: CAZyme
Location: 21402 - 22451 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934561205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_81916_7 | vegan > omnivore | 1.82238 | 0.00863 |
| k141_81916_8 | vegan > omnivore | 1.87711 | 0.00863 |
| k141_81916_9 | vegan > omnivore | 2.13695 | 0.00863 |
| k141_81916_9 | vegetarian > omnivore | 1.24110 | 0.00863 |
| k141_81916_10 | vegetarian > omnivore | 1.04076 | 0.00863 |
| k141_81916_11 | vegan > omnivore | 1.48507 | 0.00863 |
| k141_81916_11 | vegetarian > omnivore | 1.25188 | 0.00863 |
| k141_81916_13 | vegetarian > omnivore | 1.22342 | 0.00863 |
| k141_81916_13 | vegetarian > vegan | 2.53801 | 0.04518 |
| k141_81916_14 | vegetarian > omnivore | 1.41132 | 0.00863 |
| k141_81916_14 | vegetarian > vegan | 1.32392 | 0.04518 |
| k141_81916_15 | vegan > omnivore | 1.23064 | 0.00863 |
| k141_81916_15 | vegetarian > omnivore | 1.14682 | 0.00863 |