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Cluster: BF234_bin.2_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_422455 k141_422455_10 8919 10592 - 2.A.35.2.1
TF k141_422455 k141_422455_11 11081 11962 - HTH_AraC
pfam k141_422455 k141_422455_12 12251 12973 - Glucosamine_iso
CAZyme k141_422455 k141_422455_13 12993 14060 - GH179
pfam k141_422455 k141_422455_14 14529 18143 - RNA_pol_Rpb1_2 | RNA_pol_Rpb1_3 | RNA_pol_Rpb1_1 | RNA_pol_Rpb1_5 | RNA_pol_Rpb1_4
pfam k141_422455 k141_422455_15 18231 21959 - RNA_pol_Rpb2_6 | RNA_pol_Rpb2_7 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_2 | RNA_pol_Rpb2_1 | RNA_pol_Rpb2_3 | RNA_pol_Rpb2_45
TC k141_422455 k141_422455_16 22313 23845 + 2.A.2.3.2
TF k141_422455 k141_422455_17 24139 24381 - HTH_3
CAZyme k141_422455 k141_422455_18 24771 25796 - GH177
Gene ID: k141_422455_10
Type: TC
Location: 8919 - 10592 (-)
Gene ID: k141_422455_11
Type: TF
Location: 11081 - 11962 (-)
Gene ID: k141_422455_12
Type: pfam
Location: 12251 - 12973 (-)
Gene ID: k141_422455_13
Type: CAZyme
Location: 12993 - 14060 (-)
Gene ID: k141_422455_14
Type: pfam
Location: 14529 - 18143 (-)
Gene ID: k141_422455_15
Type: pfam
Location: 18231 - 21959 (-)
Gene ID: k141_422455_16
Type: TC
Location: 22313 - 23845 (+)
Gene ID: k141_422455_17
Type: TF
Location: 24139 - 24381 (-)
Gene ID: k141_422455_18
Type: CAZyme
Location: 24771 - 25796 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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