Cluster: BF223_maxbin.011_sub_CGC19
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: BF223_maxbin.011_sub
- CGC Family ID: CGCFAM_03417
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8903 | k141_8903_131 | 157037 | 159769 | - | GH2 |
| TC | k141_8903 | k141_8903_132 | 159862 | 160758 | - | 3.A.1.1.18 |
| TC | k141_8903 | k141_8903_133 | 160755 | 161804 | - | 3.A.1.1.20 |
| STP | k141_8903 | k141_8903_134 | 161936 | 163309 | - | SBP_bac_1 |
| CAZyme | k141_8903 | k141_8903_135 | 163759 | 165126 | - | GH1 |
| pfam | k141_8903 | k141_8903_136 | 165242 | 166609 | - | AAA_14 | DUF4143 |
| CAZyme | k141_8903 | k141_8903_137 | 167068 | 168252 | + | CE2 |
| CAZyme | k141_8903 | k141_8903_138 | 168486 | 170303 | - | CE20 |
| pfam | k141_8903 | k141_8903_139 | 170578 | 171618 | + | KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N |
| pfam | k141_8903 | k141_8903_140 | 172077 | 173129 | - | KARI_C | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | KARI_N |
| TC | k141_8903 | k141_8903_141 | 173439 | 174788 | - | 2.A.1.6.10 |
| TC | k141_8903 | k141_8903_142 | 175241 | 176797 | - | 2.A.1.2.93 |
| TC | k141_8903 | k141_8903_143 | 177174 | 178031 | - | 3.A.1.1.45 |
| TC | k141_8903 | k141_8903_144 | 178031 | 178972 | - | 3.A.1.1.45 |
| pfam | k141_8903 | k141_8903_145 | 178994 | 180280 | - | SBP_bac_1 | SBP_bac_8 |
| CAZyme | k141_8903 | k141_8903_146 | 180618 | 182519 | + | GH13_44 |
| pfam | k141_8903 | k141_8903_147 | 182686 | 183342 | - | DUF624 |
| CAZyme | k141_8903 | k141_8903_148 | 183482 | 184996 | - | GH13_18 |
Gene ID: k141_8903_131
Type: CAZyme
Location: 157037 - 159769 (-)
Type: CAZyme
Location: 157037 - 159769 (-)
Gene ID: k141_8903_132
Type: TC
Location: 159862 - 160758 (-)
Type: TC
Location: 159862 - 160758 (-)
Gene ID: k141_8903_133
Type: TC
Location: 160755 - 161804 (-)
Type: TC
Location: 160755 - 161804 (-)
Gene ID: k141_8903_134
Type: STP
Location: 161936 - 163309 (-)
Type: STP
Location: 161936 - 163309 (-)
Gene ID: k141_8903_135
Type: CAZyme
Location: 163759 - 165126 (-)
Type: CAZyme
Location: 163759 - 165126 (-)
Gene ID: k141_8903_136
Type: pfam
Location: 165242 - 166609 (-)
Type: pfam
Location: 165242 - 166609 (-)
Gene ID: k141_8903_137
Type: CAZyme
Location: 167068 - 168252 (+)
Type: CAZyme
Location: 167068 - 168252 (+)
Gene ID: k141_8903_138
Type: CAZyme
Location: 168486 - 170303 (-)
Type: CAZyme
Location: 168486 - 170303 (-)
Gene ID: k141_8903_139
Type: pfam
Location: 170578 - 171618 (+)
Type: pfam
Location: 170578 - 171618 (+)
Gene ID: k141_8903_140
Type: pfam
Location: 172077 - 173129 (-)
Type: pfam
Location: 172077 - 173129 (-)
Gene ID: k141_8903_141
Type: TC
Location: 173439 - 174788 (-)
Type: TC
Location: 173439 - 174788 (-)
Gene ID: k141_8903_142
Type: TC
Location: 175241 - 176797 (-)
Type: TC
Location: 175241 - 176797 (-)
Gene ID: k141_8903_143
Type: TC
Location: 177174 - 178031 (-)
Type: TC
Location: 177174 - 178031 (-)
Gene ID: k141_8903_144
Type: TC
Location: 178031 - 178972 (-)
Type: TC
Location: 178031 - 178972 (-)
Gene ID: k141_8903_145
Type: pfam
Location: 178994 - 180280 (-)
Type: pfam
Location: 178994 - 180280 (-)
Gene ID: k141_8903_146
Type: CAZyme
Location: 180618 - 182519 (+)
Type: CAZyme
Location: 180618 - 182519 (+)
Gene ID: k141_8903_147
Type: pfam
Location: 182686 - 183342 (-)
Type: pfam
Location: 182686 - 183342 (-)
Gene ID: k141_8903_148
Type: CAZyme
Location: 183482 - 184996 (-)
Type: CAZyme
Location: 183482 - 184996 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium kashiwanohense_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_8903_143 | vegetarian > omnivore | 1.16256 | 0.01770 |
| k141_8903_146 | vegan > omnivore | 1.26549 | 0.00629 |
| k141_8903_147 | vegan > omnivore | 2.18932 | 0.00629 |
| k141_8903_147 | vegetarian > omnivore | 1.76927 | 0.01770 |