Cluster: BF223_maxbin.007_sub_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate: arabinogalactan/xylan
- Genome ID: BF223_maxbin.007_sub
- CGC Family ID: CGCFAM_00936
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_36306 | k141_36306_105 | 126943 | 128580 | - | GH43_4 |
| CAZyme | k141_36306 | k141_36306_106 | 128643 | 130202 | - | GH43_4 |
| CAZyme | k141_36306 | k141_36306_107 | 130321 | 132429 | + | GH43_27 |
| TF | k141_36306 | k141_36306_108 | 132524 | 133615 | + | LacI |
| CAZyme | k141_36306 | k141_36306_109 | 133753 | 134784 | + | GH43_26 |
| STP | k141_36306 | k141_36306_110 | 135092 | 136399 | + | SBP_bac_1 |
| TC | k141_36306 | k141_36306_111 | 136500 | 137441 | + | 3.A.1.1.20 |
| TC | k141_36306 | k141_36306_112 | 137438 | 138340 | + | 3.A.1.1.36 |
| CAZyme | k141_36306 | k141_36306_113 | 138468 | 140906 | + | GH146 |
| CAZyme | k141_36306 | k141_36306_114 | 140950 | 143304 | - | GT51 |
| pfam | k141_36306 | k141_36306_115 | 143512 | 144654 | + | Inos-1-P_synth |
| pfam | k141_36306 | k141_36306_116 | 144864 | 146015 | + | PAP2 |
| TC | k141_36306 | k141_36306_117 | 146124 | 149063 | + | 3.A.7.7.1 |
Gene ID: k141_36306_105
Type: CAZyme
Location: 126943 - 128580 (-)
Type: CAZyme
Location: 126943 - 128580 (-)
Gene ID: k141_36306_106
Type: CAZyme
Location: 128643 - 130202 (-)
Type: CAZyme
Location: 128643 - 130202 (-)
Gene ID: k141_36306_107
Type: CAZyme
Location: 130321 - 132429 (+)
Type: CAZyme
Location: 130321 - 132429 (+)
Gene ID: k141_36306_108
Type: TF
Location: 132524 - 133615 (+)
Type: TF
Location: 132524 - 133615 (+)
Gene ID: k141_36306_109
Type: CAZyme
Location: 133753 - 134784 (+)
Type: CAZyme
Location: 133753 - 134784 (+)
Gene ID: k141_36306_110
Type: STP
Location: 135092 - 136399 (+)
Type: STP
Location: 135092 - 136399 (+)
Gene ID: k141_36306_111
Type: TC
Location: 136500 - 137441 (+)
Type: TC
Location: 136500 - 137441 (+)
Gene ID: k141_36306_112
Type: TC
Location: 137438 - 138340 (+)
Type: TC
Location: 137438 - 138340 (+)
Gene ID: k141_36306_113
Type: CAZyme
Location: 138468 - 140906 (+)
Type: CAZyme
Location: 138468 - 140906 (+)
Gene ID: k141_36306_114
Type: CAZyme
Location: 140950 - 143304 (-)
Type: CAZyme
Location: 140950 - 143304 (-)
Gene ID: k141_36306_115
Type: pfam
Location: 143512 - 144654 (+)
Type: pfam
Location: 143512 - 144654 (+)
Gene ID: k141_36306_116
Type: pfam
Location: 144864 - 146015 (+)
Type: pfam
Location: 144864 - 146015 (+)
Gene ID: k141_36306_117
Type: TC
Location: 146124 - 149063 (+)
Type: TC
Location: 146124 - 149063 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium globosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_36306_110 | vegan > omnivore | 1.76733 | 0.00290 |
| k141_36306_110 | vegetarian > omnivore | 1.05444 | 0.01548 |
| k141_36306_111 | vegan > omnivore | 1.88309 | 0.00290 |
| k141_36306_111 | vegetarian > omnivore | 1.21517 | 0.01548 |
| k141_36306_112 | vegan > omnivore | 1.95770 | 0.00290 |
| k141_36306_112 | vegetarian > omnivore | 1.27550 | 0.01548 |