Cluster: BF223_maxbin.003_CGC8
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: BF223_maxbin.003
- CGC Family ID: CGCFAM_03554
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39530 | k141_39530_125 | 175267 | 176316 | - | GH105 |
| pfam | k141_39530 | k141_39530_126 | 176331 | 177125 | - | Polysacc_deac_1 |
| pfam | k141_39530 | k141_39530_127 | 177122 | 177934 | - | Polysacc_deac_1 |
| CAZyme | k141_39530 | k141_39530_128 | 177962 | 181114 | - | CE12 | PL11 |
| NULL(UNKNOWN) | k141_39530 | k141_39530_129 | 181173 | 182744 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_39530 | k141_39530_130 | 182791 | 183723 | - | 3.A.1.1.29 |
| TC | k141_39530 | k141_39530_131 | 183743 | 184732 | - | 3.A.1.1.10 |
| CAZyme | k141_39530 | k141_39530_132 | 185313 | 188579 | + | GH2 |
| TF | k141_39530 | k141_39530_133 | 188643 | 190946 | - | HTH_AraC |
| pfam | k141_39530 | k141_39530_134 | 191269 | 192642 | + | MatE | MatE |
| CAZyme | k141_39530 | k141_39530_135 | 192642 | 194729 | + | GH106 |
Gene ID: k141_39530_125
Type: CAZyme
Location: 175267 - 176316 (-)
Type: CAZyme
Location: 175267 - 176316 (-)
Gene ID: k141_39530_126
Type: pfam
Location: 176331 - 177125 (-)
Type: pfam
Location: 176331 - 177125 (-)
Gene ID: k141_39530_127
Type: pfam
Location: 177122 - 177934 (-)
Type: pfam
Location: 177122 - 177934 (-)
Gene ID: k141_39530_128
Type: CAZyme
Location: 177962 - 181114 (-)
Type: CAZyme
Location: 177962 - 181114 (-)
Gene ID: k141_39530_129
Type:
Location: 181173 - 182744 (-)
Type:
Location: 181173 - 182744 (-)
Gene ID: k141_39530_130
Type: TC
Location: 182791 - 183723 (-)
Type: TC
Location: 182791 - 183723 (-)
Gene ID: k141_39530_131
Type: TC
Location: 183743 - 184732 (-)
Type: TC
Location: 183743 - 184732 (-)
Gene ID: k141_39530_132
Type: CAZyme
Location: 185313 - 188579 (+)
Type: CAZyme
Location: 185313 - 188579 (+)
Gene ID: k141_39530_133
Type: TF
Location: 188643 - 190946 (-)
Type: TF
Location: 188643 - 190946 (-)
Gene ID: k141_39530_134
Type: pfam
Location: 191269 - 192642 (+)
Type: pfam
Location: 191269 - 192642 (+)
Gene ID: k141_39530_135
Type: CAZyme
Location: 192642 - 194729 (+)
Type: CAZyme
Location: 192642 - 194729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900554145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_39530_125 | vegan > omnivore | 1.12674 | 0.01475 |
| k141_39530_125 | vegetarian > omnivore | 1.04066 | 0.00494 |
| k141_39530_126 | vegetarian > vegan | 1.50391 | 0.02890 |
| k141_39530_126 | vegetarian > omnivore | 2.04810 | 0.00494 |
| k141_39530_127 | vegan > omnivore | 1.07132 | 0.01475 |
| k141_39530_127 | vegetarian > omnivore | 1.47131 | 0.00494 |
| k141_39530_128 | vegetarian > omnivore | 1.33234 | 0.00494 |
| k141_39530_128 | vegan > omnivore | 1.05481 | 0.01475 |
| k141_39530_129 | vegetarian > omnivore | 1.18937 | 0.00494 |
| k141_39530_129 | vegan > omnivore | 1.07267 | 0.01475 |
| k141_39530_130 | vegetarian > omnivore | 1.10420 | 0.00494 |
| k141_39530_131 | vegetarian > omnivore | 1.05608 | 0.00494 |
| k141_39530_132 | vegan > omnivore | 1.05492 | 0.01475 |
| k141_39530_132 | vegetarian > omnivore | 1.51653 | 0.00494 |
| k141_39530_133 | vegetarian > omnivore | 1.30712 | 0.00494 |
| k141_39530_134 | vegan > omnivore | 1.16747 | 0.01475 |
| k141_39530_134 | vegetarian > omnivore | 1.64255 | 0.00494 |
| k141_39530_135 | vegan > omnivore | 1.11271 | 0.01475 |
| k141_39530_135 | vegetarian > omnivore | 1.55126 | 0.00494 |