Cluster: BF223_maxbin.003_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: BF223_maxbin.003
- CGC Family ID: CGCFAM_00466
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39530 | k141_39530_14 | 15374 | 16750 | - | 2.A.2.1.1 |
| CAZyme | k141_39530 | k141_39530_15 | 16834 | 19479 | - | CBM67 | GH78 |
| CAZyme | k141_39530 | k141_39530_16 | 19541 | 22336 | - | CBM67 | GH78 |
| peptidase | k141_39530 | k141_39530_17 | 22358 | 23449 | - | S09.UPC |
| pfam | k141_39530 | k141_39530_18 | 24093 | 24875 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | k141_39530 | k141_39530_19 | 24988 | 27243 | - | GH3 |
Gene ID: k141_39530_14
Type: TC
Location: 15374 - 16750 (-)
Type: TC
Location: 15374 - 16750 (-)
Gene ID: k141_39530_15
Type: CAZyme
Location: 16834 - 19479 (-)
Type: CAZyme
Location: 16834 - 19479 (-)
Gene ID: k141_39530_16
Type: CAZyme
Location: 19541 - 22336 (-)
Type: CAZyme
Location: 19541 - 22336 (-)
Gene ID: k141_39530_17
Type: peptidase
Location: 22358 - 23449 (-)
Type: peptidase
Location: 22358 - 23449 (-)
Gene ID: k141_39530_18
Type: pfam
Location: 24093 - 24875 (-)
Type: pfam
Location: 24093 - 24875 (-)
Gene ID: k141_39530_19
Type: CAZyme
Location: 24988 - 27243 (-)
Type: CAZyme
Location: 24988 - 27243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900554145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_39530_14 | vegetarian > omnivore | 1.04419 | 0.00494 |
| k141_39530_18 | vegetarian > omnivore | 1.08401 | 0.00494 |
| k141_39530_19 | vegetarian > omnivore | 1.18681 | 0.00494 |
| k141_39530_19 | vegetarian > vegan | 1.07624 | 0.04317 |