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Cluster: BF223_maxbin.003_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_64888 k141_64888_3 4067 5293 + 3.A.1.1.16
TC k141_64888 k141_64888_4 5311 6198 + 3.A.1.1.44
TC k141_64888 k141_64888_5 6202 7056 + 3.A.1.1.6
CAZyme k141_64888 k141_64888_6 7082 8809 + CBM34 | GH13_20
TF k141_64888 k141_64888_7 8813 9820 + LacI
CAZyme k141_64888 k141_64888_8 9832 12102 + CBM20 | GH13_2
TC k141_64888 k141_64888_9 12553 14151 + 1.A.34.1.3
Gene ID: k141_64888_3
Type: TC
Location: 4067 - 5293 (+)
Gene ID: k141_64888_4
Type: TC
Location: 5311 - 6198 (+)
Gene ID: k141_64888_5
Type: TC
Location: 6202 - 7056 (+)
Gene ID: k141_64888_6
Type: CAZyme
Location: 7082 - 8809 (+)
Gene ID: k141_64888_7
Type: TF
Location: 8813 - 9820 (+)
Gene ID: k141_64888_8
Type: CAZyme
Location: 9832 - 12102 (+)
Gene ID: k141_64888_9
Type: TC
Location: 12553 - 14151 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_64888_3 vegan > omnivore 1.61492 0.01475
k141_64888_4 vegan > omnivore 1.33613 0.01475
k141_64888_4 vegetarian > omnivore 1.18709 0.00494
k141_64888_5 vegan > omnivore 1.63761 0.01475
k141_64888_5 vegetarian > omnivore 1.33644 0.00494
k141_64888_6 vegan > omnivore 1.14142 0.01475
k141_64888_7 vegan > omnivore 1.28192 0.01475
k141_64888_8 vegan > omnivore 2.13446 0.01475
k141_64888_8 vegetarian > omnivore 1.52481 0.00494

🧭 Explore Read Mapping of CGC

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