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Cluster: BF223_maxbin.003_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50040 k141_50040_16 16497 17450 + 3.A.1.1.10
TC k141_50040 k141_50040_17 17466 18398 + 3.A.1.1.10
STP k141_50040 k141_50040_18 18452 20110 + SBP_bac_1
CAZyme k141_50040 k141_50040_19 20209 21882 + CE12
CAZyme k141_50040 k141_50040_20 21897 24059 + GH112
CAZyme k141_50040 k141_50040_21 24076 25557 + GH51_1
pfam k141_50040 k141_50040_22 25554 25811 + DUF6171
TC k141_50040 k141_50040_23 25816 27180 + 2.A.66.1.33
CAZyme k141_50040 k141_50040_24 27226 28578 - GH28
NULL(UNKNOWN) k141_50040 k141_50040_25 28693 29397 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_50040 k141_50040_26 29410 30252 + AP_endonuc_2
CAZyme k141_50040 k141_50040_27 30283 31332 + GH105
pfam k141_50040 k141_50040_28 31504 32103 + Resolvase
pfam k141_50040 k141_50040_29 32381 34411 + Flg_new | Flg_new | Flg_new
CAZyme k141_50040 k141_50040_30 34663 35406 - CE12
NULL(UNKNOWN) k141_50040 k141_50040_31 35648 35758 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_50040 k141_50040_32 35768 38122 - GH3
CAZyme k141_50040 k141_50040_33 38119 40878 - CBM67 | GH78
Gene ID: k141_50040_16
Type: TC
Location: 16497 - 17450 (+)
Gene ID: k141_50040_17
Type: TC
Location: 17466 - 18398 (+)
Gene ID: k141_50040_18
Type: STP
Location: 18452 - 20110 (+)
Gene ID: k141_50040_19
Type: CAZyme
Location: 20209 - 21882 (+)
Gene ID: k141_50040_20
Type: CAZyme
Location: 21897 - 24059 (+)
Gene ID: k141_50040_21
Type: CAZyme
Location: 24076 - 25557 (+)
Gene ID: k141_50040_22
Type: pfam
Location: 25554 - 25811 (+)
Gene ID: k141_50040_23
Type: TC
Location: 25816 - 27180 (+)
Gene ID: k141_50040_24
Type: CAZyme
Location: 27226 - 28578 (-)
Gene ID: k141_50040_25
Type:
Location: 28693 - 29397 (+)
Gene ID: k141_50040_26
Type: pfam
Location: 29410 - 30252 (+)
Gene ID: k141_50040_27
Type: CAZyme
Location: 30283 - 31332 (+)
Gene ID: k141_50040_28
Type: pfam
Location: 31504 - 32103 (+)
Gene ID: k141_50040_29
Type: pfam
Location: 32381 - 34411 (+)
Gene ID: k141_50040_30
Type: CAZyme
Location: 34663 - 35406 (-)
Gene ID: k141_50040_31
Type:
Location: 35648 - 35758 (-)
Gene ID: k141_50040_32
Type: CAZyme
Location: 35768 - 38122 (-)
Gene ID: k141_50040_33
Type: CAZyme
Location: 38119 - 40878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50040_16 vegan > omnivore 1.96652 0.01475
k141_50040_17 vegan > omnivore 1.80915 0.01475
k141_50040_18 vegan > omnivore 2.04671 0.01475
k141_50040_18 vegetarian > omnivore 1.09350 0.00494
k141_50040_19 vegan > omnivore 2.19367 0.01475
k141_50040_19 vegetarian > omnivore 1.55643 0.00494
k141_50040_20 vegan > omnivore 1.84429 0.01475
k141_50040_20 vegetarian > omnivore 1.26950 0.00494
k141_50040_24 vegan > omnivore 1.19731 0.01475
k141_50040_24 vegetarian > omnivore 1.49174 0.00494
k141_50040_27 vegan > omnivore 1.18140 0.01475
k141_50040_27 vegetarian > omnivore 1.05831 0.00494

🧭 Explore Read Mapping of CGC

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