Cluster: BF223_maxbin.003_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: BF223_maxbin.003
- CGC Family ID: CGCFAM_02422
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_77771 | k141_77771_183 | 185686 | 186591 | - | 3.A.1.1.10 |
| TC | k141_77771 | k141_77771_184 | 186607 | 187584 | - | 3.A.1.1.10 |
| CAZyme | k141_77771 | k141_77771_185 | 187599 | 188615 | - | GH179 |
| TF | k141_77771 | k141_77771_186 | 188602 | 190968 | - | HTH_AraC |
| CAZyme | k141_77771 | k141_77771_187 | 191093 | 192217 | - | GH177 |
| pfam | k141_77771 | k141_77771_188 | 192210 | 192983 | - | AP_endonuc_2 |
| CAZyme | k141_77771 | k141_77771_189 | 192996 | 195011 | - | PL12 |
Gene ID: k141_77771_183
Type: TC
Location: 185686 - 186591 (-)
Type: TC
Location: 185686 - 186591 (-)
Gene ID: k141_77771_184
Type: TC
Location: 186607 - 187584 (-)
Type: TC
Location: 186607 - 187584 (-)
Gene ID: k141_77771_185
Type: CAZyme
Location: 187599 - 188615 (-)
Type: CAZyme
Location: 187599 - 188615 (-)
Gene ID: k141_77771_186
Type: TF
Location: 188602 - 190968 (-)
Type: TF
Location: 188602 - 190968 (-)
Gene ID: k141_77771_187
Type: CAZyme
Location: 191093 - 192217 (-)
Type: CAZyme
Location: 191093 - 192217 (-)
Gene ID: k141_77771_188
Type: pfam
Location: 192210 - 192983 (-)
Type: pfam
Location: 192210 - 192983 (-)
Gene ID: k141_77771_189
Type: CAZyme
Location: 192996 - 195011 (-)
Type: CAZyme
Location: 192996 - 195011 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900554145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_77771_183 | vegan > omnivore | 2.08298 | 0.01475 |
| k141_77771_183 | vegetarian > omnivore | 1.89217 | 0.00494 |
| k141_77771_184 | vegan > omnivore | 2.65203 | 0.01475 |
| k141_77771_184 | vegetarian > omnivore | 1.72213 | 0.00494 |
| k141_77771_185 | vegan > omnivore | 2.33844 | 0.01475 |
| k141_77771_185 | vegetarian > omnivore | 2.06813 | 0.00494 |
| k141_77771_187 | vegan > omnivore | 1.27921 | 0.01475 |
| k141_77771_189 | vegan > omnivore | 2.01857 | 0.01475 |
| k141_77771_189 | vegetarian > omnivore | 1.68179 | 0.00494 |