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Cluster: BF223_10_sub_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_4317 k141_4317_40 46171 47499 + GH125
pfam k141_4317 k141_4317_41 47584 48528 + BPD_transp_1
TC k141_4317 k141_4317_42 48546 49424 + 3.A.1.1.10
STP k141_4317 k141_4317_43 49493 50947 + SBP_bac_1
CAZyme k141_4317 k141_4317_44 51085 53577 + GH2
CAZyme k141_4317 k141_4317_45 53595 55388 + GH20
CAZyme k141_4317 k141_4317_46 55400 56824 + GH29
Gene ID: k141_4317_40
Type: CAZyme
Location: 46171 - 47499 (+)
Gene ID: k141_4317_41
Type: pfam
Location: 47584 - 48528 (+)
Gene ID: k141_4317_42
Type: TC
Location: 48546 - 49424 (+)
Gene ID: k141_4317_43
Type: STP
Location: 49493 - 50947 (+)
Gene ID: k141_4317_44
Type: CAZyme
Location: 51085 - 53577 (+)
Gene ID: k141_4317_45
Type: CAZyme
Location: 53595 - 55388 (+)
Gene ID: k141_4317_46
Type: CAZyme
Location: 55400 - 56824 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_4317_45 vegan > omnivore 1.71492 0.04238
k141_4317_45 vegetarian > omnivore 1.08245 0.04972

🧭 Explore Read Mapping of CGC

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